Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01153 ATGGAAGAGACACGAGAAGATGCAGGGCCAGCAGAGCGAAGGCCATCCAACATGTCATGGTGGCCTTCAGATTTTGTTGAAAAATTCGAATCTGTTTCTTTGAGCTCTCAAGATGAGACCTTAAATAATAAAGAATCACCTAGACATTCTAACCGGGATGTTATGTCACCTCAGAAGGCGTCACAAATTCTGTGGCGCACTGGAATGCTTTCAGAACCAATACCCAACGGTTTTTATTCAGTCATTCTGGAGAAAAGACTCAAGAAACTTTTTGATAGTATTCCTACTTTGGAGGAGCTTCAAGCTTTGGGTGGAGAGGGTTTTAGGGCTGATGTCATTGTTGTGGATGCAGAGAAAGATAGAAGGTTATCTATGTTGAAGCAACTAATTGTGGCATTAGTTAGAGGATTGAATTCAAACCCACCTGCGATGATTAAGAAGATAGCTGGATTAGTTTCTGACTTTTATAAGCGATCAAATGTAGAAAGCCCAGCAAAAGCTGCACTTGAGGAATCATCCCACATGTTTGAGAATCGTGGCGTCCAGATGCTGGGGCAAATAAGGCATGGTTCGTGCCGTCCTCGAGCCATCTTATTTAAAGTATTAGCAGATACTGTAGGTCTTGAAAGTAGACTTATGATGGGTTTTCCAAATGATGGGGCTGCTGAATGTGTAGACTCTTACAAGCATATGTCAGTGATAGTTGTGTTAAATTCTGTGGAACTGCTGGTTGATCTTATGCGTTTTCCTGGCCAACTATTACCACGATCAACCAAGTCAATTCTTATGACACATATTTCTGCAGCAGGAGAGAGTGATTCTGCAGAAAATGATTCCTGTGACTCACCATTAGAACCAAATAGTCCTTTATATGGGGTTTCAGAGAGTGTTGAAAAGGAGGAAAACCTCCAATTCCATAGAAGATTTGAAGTGTCTTCGAATGTATCAGGCCTTCCCTTGCGAAATATGATGTTACGATCAAATACCAGTCTGGACAGGAATTGGAGTTTTTCTCATAGTGAACCCAACATTGCTACTGCATTTGGTCGGCGTAGTCGGAGAAAGGTCATTGCTGAACAGAGGACTGCTAGTTCAAGTCCAGAACATCCATCATTGCGAGCTCATGGACGGTCCAAGCTTAGTGGTGACAGGACTTCTTTTAGAGATTTTGCTGATGACCAGTCTACACTAAGATCCAGCTACAAGTCAGATGGCGCTTCCTCATCAGAAGCTCGTAGGATACGAAGAAGAAGTATCAGCATTACACCAGAGATTGGTGATGATATTGCTAGGGCTGTACGGGCGATGAATAAAACGCTAAAGCAAAAGCGTCTTCCGAGAGAGCAGGGGGGTGATAGTTCATTATCTCATTCTCCAATTGACAGAACCAGCAGTTTAGATCTTCAGAAAAATGTGTCAAATTTCCATCTTGATGGTCACCATGAGAGGTCCCCCTTATATTTGTTACACCGTGACCCTGTGACGTCTCAAAAGGCAATGTCGTTACCTTCTTCTCCGCATGATTATAGAGTACAAGCCTCTGAGAGAAGCGAGGCATCAGAATATACAACGAATGATGAACTGGAGTCTACTTGGAATAAAATCCTCGAATCACCAATGTTCAGTAATCGACCTCTGTTACCATATGAAGAATGGAATATTGATTTCACAGAATTGAATGTTGGAACTCGTGTTGGGATTGGGTTCTTCGGAGAAGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCTATCAAGGTTTTCCTAGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCCATTCTCAGGTATTTTACATTGATTTGCTTTATCTTATTTCTCGGTGCATGCACAAAGCCCCCACGCTTGTCAATGGTGACTGAATACATGGAGATGGGATCTTTGTTTTACTTGATTCATGTGAGCGGTCAGAAGAAGAAGCTTAGCTGGCGGAGAAGACTAAAGATGTTGCGAGACATATGCCGGGGCTTAATGCACATACATCGTATGAAGATTATTCACCGTGATGTGAAAAGTGCAAATTGTCTTGTGGACAAGCATTGGATAGTGAAAATATGTGATTTTGGACTTTCAAGAATAATAACAGAATCCCCCATGAGAGATTCCTCGTCAGCTGGAACCCCAGAATGGATGGCTCCTGAACTAATTCGAAATGAACCATTCTCTGAAAAATGTGATATCTTTAGCCTGGGAGTGATAATGTGGGAGCTCTGCACCTTGAATAGGCCTTGGGAAGGCGTACCCCCGGAGAGGGTGGTTTACACCGTTGCTAATGAGGGTGCTCGATTGGATATTCCTGAAGGCCCGCTAGGCAGGCTGATTTCAGAGTGTTGGGCGGAACCACATGAACGGCCAAGTTGTGAGGAGATTCTCTCTCGATTGGTGGACATCGAGTACTCAATGTGTTGA 2448 0.4301 MEETREDAGPAERRPSNMSWWPSDFVEKFESVSLSSQDETLNNKESPRHSNRDVMSPQKASQILWRTGMLSEPIPNGFYSVILEKRLKKLFDSIPTLEELQALGGEGFRADVIVVDAEKDRRLSMLKQLIVALVRGLNSNPPAMIKKIAGLVSDFYKRSNVESPAKAALEESSHMFENRGVQMLGQIRHGSCRPRAILFKVLADTVGLESRLMMGFPNDGAAECVDSYKHMSVIVVLNSVELLVDLMRFPGQLLPRSTKSILMTHISAAGESDSAENDSCDSPLEPNSPLYGVSESVEKEENLQFHRRFEVSSNVSGLPLRNMMLRSNTSLDRNWSFSHSEPNIATAFGRRSRRKVIAEQRTASSSPEHPSLRAHGRSKLSGDRTSFRDFADDQSTLRSSYKSDGASSSEARRIRRRSISITPEIGDDIARAVRAMNKTLKQKRLPREQGGDSSLSHSPIDRTSSLDLQKNVSNFHLDGHHERSPLYLLHRDPVTSQKAMSLPSSPHDYRVQASERSEASEYTTNDELESTWNKILESPMFSNRPLLPYEEWNIDFTELNVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILRYFTLICFILFLGACTKPPRLSMVTEYMEMGSLFYLIHVSGQKKKLSWRRRLKMLRDICRGLMHIHRMKIIHRDVKSANCLVDKHWIVKICDFGLSRIITESPMRDSSSAGTPEWMAPELIRNEPFSEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYTVANEGARLDIPEGPLGRLISECWAEPHERPSCEEILSRLVDIEYSMC 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01153 815 SMART serkin_6 559 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01153 815 Gene3D Phosphorylase Kinase; domain 1 552 637 - -
Gma12g01153 815 ProSiteProfiles Protein kinase domain profile. 559 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01153 815 ProSitePatterns Protein kinases ATP-binding region signature. 565 586 IPR017441 GO:0005524
Gma12g01153 815 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Gma12g01153 815 MobiDBLite consensus disorder prediction 34 57 - -
Gma12g01153 815 MobiDBLite consensus disorder prediction 372 391 - -
Gma12g01153 815 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 813 - -
Gma12g01153 815 CDD STKc_MAP3K-like 565 807 - -
Gma12g01153 815 MobiDBLite consensus disorder prediction 439 464 - -
Gma12g01153 815 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 27 813 - -
Gma12g01153 815 MobiDBLite consensus disorder prediction 392 407 - -
Gma12g01153 815 SUPERFAMILY Protein kinase-like (PK-like) 533 807 IPR011009 -
Gma12g01153 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 678 690 IPR008271 GO:0004672|GO:0006468
Gma12g01153 815 MobiDBLite consensus disorder prediction 360 415 - -
Gma12g01153 815 Pfam Protein tyrosine and serine/threonine kinase 560 807 IPR001245 GO:0004672|GO:0006468
Gma12g01153 815 Gene3D Transferase(Phosphotransferase) domain 1 638 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01153 Gma-Chr12 14485332 14494003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01153 1 815 MAP Kinase Kinase Kinase AT3G58640 68.819 0.0 1154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Gma12g01153 PK_Tyr_Ser-Thr 2.7e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01153 - - gmx:100807193 1603.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01153 12 14485332 14494003 Gma12g01153 12 14485332 14494003 ECH