Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01147 ATGAGTCAATATACCCTAATTGGGTATGATGCATCAGCTCCATATGAGGAAACAAAGGGTGCTGATAGAAATGGACCAACACGAATAATCAGCGCTGTTGGGATATCTATTACAGTTGGATGGGGTTACATAATATACATTATCTTTGCAGTTACTAGCATCCCTTACATTTTGAGTGAAAGTAATGATGCTGGTGGCTATGCCATTGCTGAAATGTTTTATCAGGCTTTCAAGACAAGATATGGAAATGGAATTGGGGTCTTCTCGTTTTTTCTACTTTGTTTGTTTATAACTGTGGATGAAGTTGGTAGTAGCTCTGAGTGGAGCACAGAACAGGATAAAGCATTTGAAAATGCCTTGGCAATTCATCCTGAGGATGCTTCAGACCGATGGGAGAAGATTGTGGCTGATATACCGGGGAAAACCTTGGAAGAGATTAAACACCACTATGAGCTCTTGGTTGAAGATGTTAACCAGATTGAATCTGGTTGTGTGCCTTTACCATCTTATAATTCTTCTCCAGAGGGCTCAACAAGCCATGCTAGTGATGAAGGAGCTGGCAAGAAGGGAGGCCACTCTTGGAATAGTAACAATGAATCTAATCATGGAACTAAGGCTTCAAGATCAGATAAGGAACGGCGAAAGGGTATTGCATGGACAGAGGATGAACACAGGTTCGATTGTACTGTGGAAGAGGCAATTCTGACAGGAAGCTTACTTGTTACCTCTTTTGTTCATGCTTCATGA 747 0.4137 MSQYTLIGYDASAPYEETKGADRNGPTRIISAVGISITVGWGYIIYIIFAVTSIPYILSESNDAGGYAIAEMFYQAFKTRYGNGIGVFSFFLLCLFITVDEVGSSSEWSTEQDKAFENALAIHPEDASDRWEKIVADIPGKTLEEIKHHYELLVEDVNQIESGCVPLPSYNSSPEGSTSHASDEGAGKKGGHSWNSNNESNHGTKASRSDKERRKGIAWTEDEHRFDCTVEEAILTGSLLVTSFVHAS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01147 248 CDD SANT 107 154 IPR001005 -
Gma12g01147 248 MobiDBLite consensus disorder prediction 165 215 - -
Gma12g01147 248 Pfam Myb-like DNA-binding domain 106 150 IPR001005 -
Gma12g01147 248 Gene3D - 100 167 - -
Gma12g01147 248 ProSiteProfiles Myb-like domain profile. 106 154 IPR001005 -
Gma12g01147 248 SUPERFAMILY Homeodomain-like 106 162 IPR009057 -
Gma12g01147 248 SMART sant 104 156 IPR001005 -
Gma12g01147 248 PANTHER AMINO-ACID PERMEASE BAT1 1 96 - -
Gma12g01147 248 PANTHER AMINO-ACID PERMEASE BAT1-LIKE PROTEIN 1 96 - -
Gma12g01147 248 MobiDBLite consensus disorder prediction 165 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01147 Gma-Chr12 14378333 14382401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01147 1 86 Organic Solute Cotransporters AT2G01170 66.667 2.11e-23 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma12g01147 Myb_DNA-binding 2.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01147 - - gsj:114371921 294.664