Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01139 ATGCGTCCACCGCGGAAGAGGGTGGATTTCTCGCGCGGCGACAAGGTGGAGATCTGCAGCAACGAGGAGGGCTTCCTCGGCTCCTACTACCCGGCCACGGTCGTGTCGCGCCTCGACAACGGCCTCTACGTCGTACGCTACGACACGCTCCTCGAGGACGACGCCTCGTTCCAGCCCCTCACCGAAACCCTATTTCCGAAAGAGCTCCGTCCCCATCCGCCACGTGTCCCCAGGACCCACTTCGCGCTCCACCAGTGCGTCGACGCCTTCGACAACGACGGCTGGTGGCTCGGCCAGATCACCGGCAAGAAGGACGGCGAGCATTACTATGGTTCACCACGAGTGGAGCCATGGCGAGTGGGTTTTGTCCAATTGAAGTTGAATTCGAAGGAAGAGCCTTCAGGGTTTCTAAGCGTAAATAGAGTCATGAGCCTGGACAGTTTGGAAGTTGATTTGAGTAAAGAACCCGCAGCTCCAATAAATCATAATGCACACCAGCAAATTGATGCAGAAACTAATGTGATAGTAAGCAATAGGGTAAGATATAAATCAGCACCAATATGCCGCGAGCAAGAAAAATGGGATAGAGCTACCAAGGCAGCAATTGGAGGCAGTGATGTGGTGTTCCGTATAATAAAGTTAAAGAGGAAGTTGCAAATGTTTACCTTGGGTATAGGTGGTGTTGGTCTGGTTTCAGCTTATGTTTCTTATTCCCCTGAGATTGCAGCTAGAACAAGCAATTTGTGA 747 0.5194 MRPPRKRVDFSRGDKVEICSNEEGFLGSYYPATVVSRLDNGLYVVRYDTLLEDDASFQPLTETLFPKELRPHPPRVPRTHFALHQCVDAFDNDGWWLGQITGKKDGEHYYGSPRVEPWRVGFVQLKLNSKEEPSGFLSVNRVMSLDSLEVDLSKEPAAPINHNAHQQIDAETNVIVSNRVRYKSAPICREQEKWDRATKAAIGGSDVVFRIIKLKRKLQMFTLGIGGVGLVSAYVSYSPEIAARTSNL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01139 248 SMART agenet_At_2 8 77 IPR014002 -
Gma12g01139 248 Gene3D - 1 81 - -
Gma12g01139 248 PANTHER NF-KAPPA-B INHIBITOR-LIKE PROTEIN-RELATED 126 244 - -
Gma12g01139 248 Pfam Agenet domain 13 74 IPR008395 -
Gma12g01139 248 PANTHER PROTEIN CONSERVED ONLY IN THE GREEN LINEAGE 160, CHLOROPLASTIC 126 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01139 Gma-Chr12 14194265 14198415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01139 20 106 PHD Transcription Factor Family AT5G58610 35.514 1.72e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01139 K02116 - gmx:106794115 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01139 12 14194265 14198415 Gma12g01139 12 14194265 14198415 ECH