Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01130 ATGGTTGAGTTTGTCCTCGAAACTTTGCTTGGGAATTTGAACTCACTTGTTCAAAAGGAGTTGCTACTATTTCTGGGTTTTGATCAAAACTTGGAAAAGCTTTCCAGCTTGTTGACTACAATCAAGGCAACACTTGAAGATGCTGAGGAGAAACAATTCTCAAACAGAGCTATAAAAGATTGGCTGGAAAAGCTAAAACATGCAGCTCACATCCTGGATGAAATCATTGACAAGTGTTCCTATGAAGGTTTGGGGTTGGAGTACCAAGGGGTCAAGTGTGGTCCATCAGACAAGGTACAATGCTCTTGCTTATCCTCTTTTCATCCCAAGCATGTTGTTTTCCGCTGCAAAATTGCTAAGAAAATAAAAAGAGTAAGTGATAGATTAATGGAAATTGTTGAAGAAAGGACTAAGTTTCATTTGACTAACATGGTTCttggtctaggtggacttggaaaaacaacacttgtccaattcatcttcaatcaagagaaggtagtcaaccactttgagttaagaatttgggtatgtgtttcaggagattttagtttggagagaatgacgaaagctatcatcgaagcagcatctgggcgtgcctgcaaaaatttggatctaggttcaaaaagaaaaagacttcaagatattcttcaaagaaaaaggtatttgcttgttttagatgacatctgggatgataaccaagagaattggaagatgttgaaatctgtactggcttgtggggccaagggtgcttgcattttagtcaccactcgtcaatcaaaggttgcaacaaccatgggaacaatacctactcaccagttaccggttctacccgacaaatattgttgggaattgtttaagcaccaagcctttggactgaatgaacaagaacaagtagagcttgaagacatagggaaggagatagtacagaagtgtcgcggagtgcctcttgctgcaaaagcactaggaggtactttacgcttcaagagaaacaagaatgagtggctcaatgttaaggaaagcaaccttttggagttatcacacaatgaaaactccattattcctgtcctaagattgagttacttgaacctaccaattgagcacaggcaatgttttgcttattgcgcaatatttcccaaagatgaaaacatagggaagcaatatttaattgaactttggatggctaacggattcatttcatctgatgaaagattagatgctgaagatgttggtgatggagtgtggaatgaattatattggagatcattttttcaagatgttgagacagatgaatttggcaacgttacaaggtttaagatgcatgatcttgttcatgatcttgcacaatctattacagaagatgtttgttgcattacagaaaacaaATTTATAACTACTTTGCCTGAAAGAATACTTCATCTCTCAGATCATAGGTCAATGTGGAATGTACATAAGGAATCGACTGATTCAATGCAGTTGCGTCTATTCAAATCTCTGAGGACCTATATATTGCCAGATCACTATGGTGACCAACTTTCTCCTCATCCTGATGTGTTGAAATGTCATTCTTTGCGGGTGCTTGATTTTGTAAAAAGTGAAACGTTGTCATCTTCAATTGGTCTTTTAAAACATCTAAAGTACTTGAATCTTTCTGGTGGTGGCTTTGAAACTTTGCCAGAATTCCTATGTAAATTGTGGAATTTGCAGATATTGAAATTAGATCGTTGCAGTCGTCTCAAAATGTTGCCTAAAAGTTTGATATGCTTAAAAGCTCTACGGCAACTATCTTTTAGTGATTGCCAAGAACTATCAAGCTTGCCTCCTCAAATAGGGATGCTGACTTCCCTAAGGATTTTGACCAAGTTCTTTGTTGGCAAAGAAAGAGGGTTCTGTTTGGAAGAATTGGGACCAATGAAGCTTAAAGGAAATCTTGACATCAAGCatctaggaaatgtaaaaagtttaatggatgctaaagaagccaatatgtcaagtaagcaattgaataagttgcggttgtcatgggatagaaatgaagactctgaattacaggaaaatgttgaggagattcttgaagtgctccaacctgatatccaacacctttggagattagatgtggaagaattcaaaggtgctcatttcccacaatggatgtctactccttctctcaagtatttaacccttttaaatctgctgaattgtgaaaactgtttacaacttccactattggggaaactgccttctttaaagattttgGGTACAATAAATAATAATTACGTAGAATACCTCTATGAGGAGTCCTGTGATGGGGAAATAGTTTTCAGGGCTCTAGAAGATCTGACCATCCGTCATCATCCAAACTTTAAAAGGTTATCAAGGGAGTATGGGGAAAACATGTTCCCATGCCTTTCCAATCTTGAAATTACTGAATGTGCTCAATTTTTGGGAGAGGAAGTATTGCTGAAAGGGTTGGACTCTCTCACGGTATTTAGTTGTGATAAGTTTAATGTGTCACCAGGTTTTCAACGCCTTTGGAAATTGTGGATTTCTAATTGCAGAGAGGTGGAAGATTTGCAAGCTTTACAAGATATGACTTCCCTCAAGGTGTTAAGATTAAGGGATCTTCCAAAGCTAGAATCCTTGCCTGATTGCTTTGGAAACCTACCCTTGCTTTGCGAATTAATTTTTTACTGTTCCAAGTTGACGTGTCTTCCAATGAGCCTAAGACTTACCA 2731 0.2076 MVEFVLETLLGNLNSLVQKELLLFLGFDQNLEKLSSLLTTIKATLEDAEEKQFSNRAIKDWLEKLKHAAHILDEIIDKCSYEGLGLEYQGVKCGPSDKVQCSCLSSFHPKHVVFRCKIAKKIKRVSDRLMEIVEERTKFHLTNMVLGLGGLGKTTLVQFIFNQEKVVNHFELRIWVCVSGDFSLERMTKAIIEAASGRACKNLDLGSKRKRLQDILQRKRYLLVLDDIWDDNQENWKMLKSVLACGAKGACILVTTRQSKVATTMGTIPTHQLPVLPDKYCWELFKHQAFGLNEQEQVELEDIGKEIVQKCRGVPLAAKALGGTLRFKRNKNEWLNVKESNLLELSHNENSIIPVLRLSYLNLPIEHRQCFAYCAIFPKDENIGKQYLIELWMANGFISSDERLDAEDVGDGVWNELYWRSFFQDVETDEFGNVTRFKMHDLVHDLAQSITEDVCCITENKFITTLPERILHLSDHRSMWNVHKESTDSMQLRLFKSLRTYILPDHYGDQLSPHPDVLKCHSLRVLDFVKSETLSSSIGLLKHLKYLNLSGGGFETLPEFLCKLWNLQILKLDRCSRLKMLPKSLICLKALRQLSFSDCQELSSLPPQIGMLTSLRILTKFFVGKERGFCLEELGPMKLKGNLDIKHLGNVKSLMDAKEANMSSKQLNKLRLSWDRNEDSELQENVEEILEVLQPDIQHLWRLDVEEFKGAHFPQWMSTPSLKYLTLLNLLNCENCLQLPLLGKLPSLKILGTINNNYVEYLYEESCDGEIVFRALEDLTIRHHPNFKRLSREYGENMFPCLSNLEITECAQFLGEEVLLKGLDSLTVFSCDKFNVSPGFQRLWKLWISNCREVEDLQALQDMTSLKVLRLRDLPKLESLPDCFGNLPLLCELIFYCSKLTCLPMSLRLT 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01130 910 Gene3D Ribonuclease Inhibitor 467 621 IPR032675 -
Gma12g01130 910 Gene3D - 97 268 IPR027417 -
Gma12g01130 910 PANTHER DISEASE RESISTANCE PROTEIN RP 40 904 IPR044974 GO:0006952
Gma12g01130 910 PANTHER - 40 904 - -
Gma12g01130 910 Gene3D - 276 359 IPR042197 -
Gma12g01130 910 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 374 IPR027417 -
Gma12g01130 910 Pfam Rx N-terminal domain 5 87 IPR041118 -
Gma12g01130 910 PRINTS Disease resistance protein signature 142 157 - -
Gma12g01130 910 PRINTS Disease resistance protein signature 215 229 - -
Gma12g01130 910 PRINTS Disease resistance protein signature 562 578 - -
Gma12g01130 910 PRINTS Disease resistance protein signature 311 325 - -
Gma12g01130 910 SUPERFAMILY L domain-like 423 903 - -
Gma12g01130 910 Coils Coil 31 51 - -
Gma12g01130 910 CDD RX-CC_like 3 132 IPR038005 -
Gma12g01130 910 Gene3D - 360 450 IPR036388 -
Gma12g01130 910 Pfam NB-ARC domain 120 360 IPR002182 GO:0043531
Gma12g01130 910 Gene3D Ribonuclease Inhibitor 639 813 IPR032675 -
Gma12g01130 910 Gene3D Ribonuclease Inhibitor 814 910 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01130 Gma-Chr12 13968939 13971823 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01130 145 613 WRKY Transcription Factor Family AT5G45050 23.105 2.20e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01130 - - gmx:100785160 1407.51