Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01123 ATGGCGGCGGTGTTGCGGCGGCTTCGAGACCTGCAGTCCTCGGCAGGGAATAAGATCTGCGTGGACTGGTCCCAAAAGAACCCTCAGTGGGCCTCCGTCTCCTACGGCGTCTTCATGTGCCTTGAGTGCTTCAGCAAGCACCGCGGCCTCGGAGCAAGAGCAACTGGAGGCGTCAGCCGCGAACAAGGAGGGATTCTTCACGCGGAAGATGGCGGAGAACGAGTCGCGGCCGGAGGGGCTGCCGCCCTCACAGGGAGGGAAGGGATTGGGAAATTGTCTTTGGTCGCTGCCTCTGCGGCTAATGTTGTTCAGGCTGGCACGAAGGAGTTCACTTCCAAGGTATTCTGCATTGGCTTTGTGCATTTCCAAGGTCTTGGGTGTTCTTCTGTGGGATATGGAGCAACACAAGACATTGGCCCATTTTTAGTGGACACCGATGGCAGGGGCCTTAAATTCAATAACTTTTCATGGAACAAAGGGAGTGAGGTTTTCGTTTATGATATCTTTAATACCCTCAATTCCTACACTTCAAGAGATGCTTGTGTGTATGGTTGTAATGGTGCCGATGAAGGTAGCAAGATCGAAGTGATGATGACAATGGTGATGCGGTGGAATGATGGTGATGATGGTGGTGGAGGTGGTGGTGAAAATGTGATGATGACAGTGACGATGGTAGTAGGATAG 684 0.5234 MAAVLRRLRDLQSSAGNKICVDWSQKNPQWASVSYGVFMCLECFSKHRGLGARATGGVSREQGGILHAEDGGERVAAGGAAALTGREGIGKLSLVAASAANVVQAGTKEFTSKVFCIGFVHFQGLGCSSVGYGATQDIGPFLVDTDGRGLKFNNFSWNKGSEVFVYDIFNTLNSYTSRDACVYGCNGADEGSKIEVMMTMVMRWNDGDDGGGGGGENVMMTVTMVVG 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01123 227 SUPERFAMILY alpha/beta-Hydrolases 124 177 IPR029058 -
Gma12g01123 227 PRINTS HIV Rev interacting protein signature 36 53 IPR001164 GO:0005096
Gma12g01123 227 PRINTS HIV Rev interacting protein signature 17 36 IPR001164 GO:0005096
Gma12g01123 227 ProSiteProfiles ARF GTPase-activating proteins domain profile. 2 55 IPR001164 GO:0005096
Gma12g01123 227 Pfam Putative GTPase activating protein for Arf 7 53 IPR001164 GO:0005096
Gma12g01123 227 Pfam Serine carboxypeptidase 126 163 IPR001563 GO:0004185|GO:0006508
Gma12g01123 227 SMART arf_gap_3 2 127 IPR001164 GO:0005096
Gma12g01123 227 Gene3D Arf GTPase activating protein 2 59 IPR038508 -
Gma12g01123 227 SUPERFAMILY ArfGap/RecO-like zinc finger 6 52 IPR037278 -
Gma12g01123 227 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 4 52 IPR044519 GO:0005096|GO:0016192
Gma12g01123 227 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 87 114 IPR044519 GO:0005096|GO:0016192
Gma12g01123 227 Gene3D alpha/beta hydrolase 119 196 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01123 Gma-Chr12 13699645 13705529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01123 6 59 C2H2 Transcription Factor Family AT4G21160 42.593 1.55e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01123 K12492 - gmx:100792658 97.4413