Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01105 ATGACAAGCCTCAGTGCCACAACAAAACCTACAGAAGTTCAATCACCATCAGTTACAAAGGCTGTTCTGCCTACAAGAATAACAATTTTGGTCAAGAAGATTGAGTGGGAAGAGAGGAGCAGCAAGGTTGCGTCGGAATTTATAATAAGATTGGGAAATGCAAGGCACAAGAATTTAGTCAGATTGTTGGGGTTTTGCCACAACCCGCATCTAGTCTATCTTTTGTATGATTACTTGCCTAATGGGAACTTGGCTGAGAAAATGGAAATGAAATGGGATTGGGCTGCAAAATTCAGAACAGTAGTTGGAATTGCTAGAGGACTTTGCTTCCTTCACCATGAATGTTACCCAGCTATACCTCATGGTGACAAAAGGGCCAGCAACATTGTATTTGATGAAAATATGGAACCCCATTTGGCAGAATTTGGGTTCAAGCAAGTATTGAGGTGGAGCAAAGGCTCATCACCCACCACAAATAAGTGGGAAATAGGTATGACAAACAAGTGTGTGCAATATACATATGCATCAATTGATACATCATTCAATTATTGA 552 0.404 MTSLSATTKPTEVQSPSVTKAVLPTRITILVKKIEWEERSSKVASEFIIRLGNARHKNLVRLLGFCHNPHLVYLLYDYLPNGNLAEKMEMKWDWAAKFRTVVGIARGLCFLHHECYPAIPHGDKRASNIVFDENMEPHLAEFGFKQVLRWSKGSSPTTNKWEIGMTNKCVQYTYASIDTSFNY 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01105 183 Gene3D Transferase(Phosphotransferase) domain 1 8 176 - -
Gma12g01105 183 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 2 171 - -
Gma12g01105 183 Pfam Protein kinase domain 18 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01105 183 PANTHER UNNAMED PRODUCT 2 171 - -
Gma12g01105 183 SUPERFAMILY Protein kinase-like (PK-like) 17 155 IPR011009 -
Gma12g01105 183 ProSiteProfiles Protein kinase domain profile. 1 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01105 Gma-Chr12 13320899 13321450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01105 6 148 Receptor kinase-like Gene Family AT5G51350 56.463 3.06e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma12g01105 Pkinase 5.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01105 - - gsj:114391671 333.183