Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma12g01101 | ATGGATGTCTTCGACAACGATCACGACCATGACGAACCATTTGTTCGATACCACAGTAACGTTAACAGAACAATACTGTACGTGTCCATGGTTTCCTTCATAACAGTCTTGTTTCTCGTCTTCGCACTCTACCTCTACGCCCGGTGCGTCCTAAGGGGCCGGTCCCGCAACCGCGCCGCCATTCGACGTCTCACCATCGCCGCGCTTCACGTCTCTGACCTCGACGCAGCCGCCGCCGCACACCGACACGCCGAACCACCCAACGCGGGCCTCGACCCTGCCATCATAGCGTCGCTTCCAACCTTCGCCTCCAGAACGAAGGTTCTAGAAAATGGTGGTGATGGTGGCGGAGGAGGGGCCACCGTGGTGGAGTGTGCTGTGTGCTTGAGTGCTCTAGAAGGTGAAGAAAAGGCCAAGTTGCTTCCCAACTGCAACCACTTTTTTCACGTGGATTGCATTGATAAGTGGCTGGGTTCCCACTCCACATGTCCTATTTGTCGAGCCGAGGTGAAGCCGCAGCTTCAACCACAGCATCGTGAGGGTCCTGTGGGTCTTTCTCTTCACAGTGCACGTACACTGCTCAGTAGGGTGGATGGTGATGATGATAATAACAACAATGATAACGAATCATCAAAAATTAATGATTCTAATTCACGGTTGAGCTCGTTTAGGAGGATTCTCAGTAGGCAAAGATCTTCAAGAAGAGTCCAACCGTCTGGCCACGATGATGAGGATGGTGGTGTTGATCAAGATTTGGAGAGACAGTGA | 768 | 0.5221 | MDVFDNDHDHDEPFVRYHSNVNRTILYVSMVSFITVLFLVFALYLYARCVLRGRSRNRAAIRRLTIAALHVSDLDAAAAAHRHAEPPNAGLDPAIIASLPTFASRTKVLENGGDGGGGGATVVECAVCLSALEGEEKAKLLPNCNHFFHVDCIDKWLGSHSTCPICRAEVKPQLQPQHREGPVGLSLHSARTLLSRVDGDDDNNNNDNESSKINDSNSRLSSFRRILSRQRSSRRVQPSGHDDEDGGVDQDLERQ | 255 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma12g01101 | 255 | Pfam | Ring finger domain | 124 | 167 | IPR001841 | - | |
Gma12g01101 | 255 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 113 | 174 | IPR013083 | - | |
Gma12g01101 | 255 | CDD | RING-H2_PA-TM-RING | 124 | 167 | - | - | |
Gma12g01101 | 255 | ProSiteProfiles | Zinc finger RING-type profile. | 125 | 167 | IPR001841 | - | |
Gma12g01101 | 255 | SUPERFAMILY | RING/U-box | 124 | 175 | - | - | |
Gma12g01101 | 255 | MobiDBLite | consensus disorder prediction | 209 | 227 | - | - | |
Gma12g01101 | 255 | PANTHER | RING FINGER DOMAIN-CONTAINING | 7 | 255 | - | - | |
Gma12g01101 | 255 | MobiDBLite | consensus disorder prediction | 196 | 255 | - | - | |
Gma12g01101 | 255 | PANTHER | RING-H2 FINGER PROTEIN ATL40-LIKE | 7 | 255 | - | - | |
Gma12g01101 | 255 | MobiDBLite | consensus disorder prediction | 235 | 255 | - | - | |
Gma12g01101 | 255 | SMART | ring_2 | 125 | 166 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma12g01101 | Gma-Chr12 | 13183397 | 13184251 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma12g01101 | 4 | 255 | C3H Transcription Factor Family | AT2G42360 | 40.000 | 5.08e-51 | 165 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma12g01101 | K19038 | - | gmx:100811308 | 416.001 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma12g01101 | 12 | 13183397 | 13184251 | Gma12g01101 | 12 | 13183397 | 13184251 | ECH |