Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01097 ATGGCTCAATTGCCACCAAAAATTCCAAACATGACACCCAATTGGCCAGACTTTTCTTCTCTTCACCAAAAGATGCCTTCCCTCCAAACCACGTCATCAAACCAAAACCCTTCATGGGTGGATGAGATTCTTGAGTTCTCAGTGGCGAGGCGCGGGGCCCCCCGGCGGTCGGTGAGCGACTCCGTCACTTTCCTGGAGGCACCATTGCTGGACCACCATCATTGCAAAGGTGGCAGTGTTGTTGGTGGTGGCGGCGGCAACAACGAGTTCGAGAGGTTCGATGATGAACAATTCATGTCCATGTTTAGTGATGAAGCTTCAGGGAACAATAACAATAATAATACCATGATGGCACACACGTTGTCCTCCTCCAACCCTTCTACACCCTCTGATCACAACAGCATCAATGATGAGAAGGAAATGGAAAATAAGGAAGAGGAAGAGAAGAAGCAATTGAAGAATGAATCGGAGGATGAGGATAAAAGCCAATGCAAACAAGAAATCACACAACTTCCCAACAATGATGACAGTAATAATACTAGTAATGCAAATGCAACATGTTCCAGTGAAAAAATCACAGACCCCAAGAGGGTCAAAAGAATCTTGGCAAATAGGCAATCTGCGCAAAGATCAAGAGTGAGGAAGCTGCAATACATATCTGAGCTTGAGCGAAGTGTGACTTCATTACAGGCCGAAGTTTCAGTGTTGTCTCCACGGGTTGCATTTTTGGATCATCAACGTTTGCTTCTGAATGTCGACAACAGTGCTTTGAAGCAAAGAATCGCCGCGCTGGCCCAAGACAAGATTTTCAAAGATGCACATCAAGAAGCACTGAAGAGGGAGATAGAGAGACTGAGGCAAGTTTATCACCAACAAAACATAAAGAAGATGGACAATAATGCTGCAGCGTCACCACCATCCCAGTCCCCATCTCCATCACCAAAACCACGATGTGAAACTCACACTGAAAAGGAACAGCTTATCAATGTTTGA 993 0.4542 MAQLPPKIPNMTPNWPDFSSLHQKMPSLQTTSSNQNPSWVDEILEFSVARRGAPRRSVSDSVTFLEAPLLDHHHCKGGSVVGGGGGNNEFERFDDEQFMSMFSDEASGNNNNNNTMMAHTLSSSNPSTPSDHNSINDEKEMENKEEEEKKQLKNESEDEDKSQCKQEITQLPNNDDSNNTSNANATCSSEKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKKMDNNAAASPPSQSPSPSPKPRCETHTEKEQLINV 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01097 330 Gene3D - 195 266 - -
Gma12g01097 330 SMART brlzneu 192 256 IPR004827 GO:0003700|GO:0006355
Gma12g01097 330 MobiDBLite consensus disorder prediction 1 20 - -
Gma12g01097 330 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 199 214 IPR004827 GO:0003700|GO:0006355
Gma12g01097 330 Pfam bZIP transcription factor 196 239 IPR004827 GO:0003700|GO:0006355
Gma12g01097 330 Coils Coil 275 295 - -
Gma12g01097 330 MobiDBLite consensus disorder prediction 166 191 - -
Gma12g01097 330 PANTHER BASIC LEUCINE ZIPPER 34 1 327 - -
Gma12g01097 330 MobiDBLite consensus disorder prediction 133 165 - -
Gma12g01097 330 MobiDBLite consensus disorder prediction 292 306 - -
Gma12g01097 330 Coils Coil 135 162 - -
Gma12g01097 330 MobiDBLite consensus disorder prediction 103 132 - -
Gma12g01097 330 CDD bZIP_plant_RF2 197 247 IPR044759 GO:0003700|GO:0006355
Gma12g01097 330 MobiDBLite consensus disorder prediction 103 191 - -
Gma12g01097 330 MobiDBLite consensus disorder prediction 290 330 - -
Gma12g01097 330 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 327 - -
Gma12g01097 330 SUPERFAMILY Leucine zipper domain 196 250 IPR046347 GO:0003700|GO:0006355
Gma12g01097 330 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 194 246 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01097 Gma-Chr12 13073363 13075631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01097 1 273 bZIP Transcription Factor Family AT3G58120 56.579 1.34e-95 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma12g01097 bZIP_1 3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01097 - - gmx:100101873 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01097 12 13073363 13075631 Gma12g01097 12 13073363 13075631 ECH