Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01088 ATGATGAGAGAAAGTTCCAAGGGCGTGGGTGGATCTTCTTCTCTTCAATCCATGAAGGAAAAGGAAAAACACCTGGTGGAAAAGATTCAAGGGATTTTCAACAGTCTTCAGTGTGCAAGAAAGGAGGGCAGGGGTAATGACATGGTGATCTTTGAGGAGCAGATGCATCAGTTGCTCCGAGAGTGGAAGGCGGAACTGGAATCTCCGGCCAACTCCTTAGCTGATGGAAGCTTTGGTTCATTTCCCAGCGAACTAGCCCAAATGTTGCTAGGGAGTGAGGATAAAGATGATGCTACTAGTCCATTAACAAAACCTGTGCCATTGAAGAATGAGATCCATACAAATAACATTAGTGACGGCAATTTTCAGTTTTTTCAGGAGAAGCATTTTGATGATAACCAACCACTAGGTCATACTTTTGAAGGCTCTGCTTCAACTCTGTACAACAATGCTTTTAATAGCTCAGATATGACACAGTTGGATTATCATCCATTCAGTTTAAATCAAGATATGGATCACAAACCAGAAGGTTTGATTGGTCAGTTGGATTTATATCAGGACCTCAGGCACAACACAGAAATGAAAAACTCAGAATCAACTCAATTTAGTTTAGAAGGTTTTGATTGTAGCCAATTCTTTGAAGCTGATGACAATGTGCAGCATGGAGAGAATATTATACCTAACATTCTTCCAAATATCTGCCCTCCACCTTCTGCTTTCTTAGCCCCGAAATGTGCCTTATGGGACTGTTTCAGACCTGCTCAAGGGGTAGAATGGTGCCAGAACTACTGTAGTAGTTGTCATGAGCTGTTGGCAAATAATGAGGGTCTTCCAGGCATGACCCCAATTTTGCGACCTGGGGGAATTGGTGTAAAAGATGGTCCTTTGTTTGATGCTGTTCTTGCTAAGACGCAGGGAAAGGAAGTGGGCATCCCTAGTTGTGAAGGTGCTGCTTCAACTAAATCCCCTTGGAATGCTCCAGAGTTCTTTGATCTTTCTTTTCTTGAGGGTGAAACTGTCAGGGAGTGGCTCTTCTTTGACAAGCCTAGAAGGGCATTTGAAAGTGGAAATAGGAAACAGAGATCACTTCCGGATTACAGTGGGCGTGGTTGGCATGAATCAAGGAAGCAGGTGATGAAGGAACATGGGGGGCAAAAGAGGTCCTATTACATGGACCCCCAGCCACTTAGTTATCTCGAGTGGCATTTGTACGAGTACGAGATCAACAACCAGGATGGTTGTGCATTATACAGACTAGAATTAAAGCTTGTGGATAAAAAGAAAAGTCCTAAAGGAAAAGTGACCAAGGAATCTCTTACTGATTTACAGAACAAGATGGGACAGCTTACTGCTGCTGTTCCGTCAACTGATGATGGTTATGGACAACCAGTCAAGGGAAAAACAAAGACCAAGTCTGAGAATGATGAATCTCCCAAATAA 1440 0.4299 MMRESSKGVGGSSSLQSMKEKEKHLVEKIQGIFNSLQCARKEGRGNDMVIFEEQMHQLLREWKAELESPANSLADGSFGSFPSELAQMLLGSEDKDDATSPLTKPVPLKNEIHTNNISDGNFQFFQEKHFDDNQPLGHTFEGSASTLYNNAFNSSDMTQLDYHPFSLNQDMDHKPEGLIGQLDLYQDLRHNTEMKNSESTQFSLEGFDCSQFFEADDNVQHGENIIPNILPNICPPPSAFLAPKCALWDCFRPAQGVEWCQNYCSSCHELLANNEGLPGMTPILRPGGIGVKDGPLFDAVLAKTQGKEVGIPSCEGAASTKSPWNAPEFFDLSFLEGETVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLYEYEINNQDGCALYRLELKLVDKKKSPKGKVTKESLTDLQNKMGQLTAAVPSTDDGYGQPVKGKTKTKSENDESPK 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01088 479 MobiDBLite consensus disorder prediction 436 451 - -
Gma12g01088 479 PANTHER TRANSCRIPTION FACTOR VOZ1 2 475 IPR039277 GO:0006355|GO:0048578
Gma12g01088 479 MobiDBLite consensus disorder prediction 430 479 - -
Gma12g01088 479 PANTHER TRANSCRIPTION FACTOR VOZ2 2 475 - -
Gma12g01088 479 MobiDBLite consensus disorder prediction 1 21 - -
Gma12g01088 479 MobiDBLite consensus disorder prediction 94 113 - -
Gma12g01088 479 MobiDBLite consensus disorder prediction 365 387 - -
Gma12g01088 479 MobiDBLite consensus disorder prediction 356 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01088 Gma-Chr12 12969420 12972431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01088 1 454 VOZ-9 Transcription Factor Family AT1G28520 52.826 7.04e-152 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Gma12g01088 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01088 - - gmx:100808629 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01088 12 12969420 12972431 Gma12g01088 12 12969420 12972431 ECH