Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01085 ATGGATTTTGACGATATTGAAGACCATTCTGCCAAACTATTTCGAGCTCAAACCCACATATTTAATCAAACTTTCGTTTTCATAAACTCTATGTCCCTTAAATGTGCAATTGATCTGTGCATACCTGATGCCATACACAAGTATGGCCAACCCATGTCACTCTCACAACTCATTGCTTCACTTTCAATTCACCCTTCTAAGACTTGCTTCATTTCCCGCTTGATGCAAATTTTGACCCATTCCGGTTTCTTCTCTCAACACAATGCCACAGAAAATGAGCAAGAAGTGAGTTATGTGCTAACTGATGAATCTAAAGTACTCCTTAAGGACCATCCCTTTAGTATGATTTCTTTGCCACAAGTCATACTTGATCCAATTTTGACCCTACCTACACTGTTTCACACACAAAATGGGGTGACATTTTGGGATTGTGCTAGTCGTGAGCCCAAACTCAATCACCTTTTCAATGATGCCATGACTAACGACTCTCGATTGATTTCTAGTGTAGTGATTGAGAAGTGCAAGGGAGTGTTCAATGGATTAGAGTCTTTGGTTGATGTTGGGGGAGGAACGGGGACTATAGCTAAGGCCATTGCCAAGTCATTTCCGCATTTGAAGTGCATTGTATTTGATCTCCCACGTGTTGTTGATGGCTTGCAAGGAACAGAGGACATAGAATATGTTCAAGGGGACATGTTTGAAGCAATTCCTTCTTTTGATTCCATTATGTTGAAGACTATAATGCATAACTGGAACGATGAGGAATGCTTGAAAATCCTGAAGATATGTAAGGAGGCAATCGCAAGCAAAGATAAAGAAAATGTGATTATCATAGATGTGGTGATAGGAAACGAGAAGGGAGACAGTGAATTGGATCATACAAAGCTCTTCTATGATATGGAGATGATGGTGTTAGCCATTGGAAAAGAGAGAAATGAGAAAGACAAGGCTAAGTTGTTTTTCTCTGCAG 970 0.4 MDFDDIEDHSAKLFRAQTHIFNQTFVFINSMSLKCAIDLCIPDAIHKYGQPMSLSQLIASLSIHPSKTCFISRLMQILTHSGFFSQHNATENEQEVSYVLTDESKVLLKDHPFSMISLPQVILDPILTLPTLFHTQNGVTFWDCASREPKLNHLFNDAMTNDSRLISSVVIEKCKGVFNGLESLVDVGGGTGTIAKAIAKSFPHLKCIVFDLPRVVDGLQGTEDIEYVQGDMFEAIPSFDSIMLKTIMHNWNDEECLKILKICKEAIASKDKENVIIIDVVIGNEKGDSELDHTKLFYDMEMMVLAIGKERNEKDKAKLFFSA 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01085 323 Gene3D Vaccinia Virus protein VP39 108 323 IPR029063 -
Gma12g01085 323 PANTHER ORCINOL O-METHYLTRANSFERASE 6 323 - -
Gma12g01085 323 PANTHER O-METHYLTRANSFERASE 6 323 IPR016461 GO:0008168
Gma12g01085 323 Pfam O-methyltransferase domain 132 321 IPR001077 GO:0008171
Gma12g01085 323 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Gma12g01085 323 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 323 IPR016461 GO:0008168
Gma12g01085 323 Gene3D - 4 107 IPR036388 -
Gma12g01085 323 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Gma12g01085 323 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 322 IPR029063 -
Gma12g01085 323 PIRSF O-mtase 4 323 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01085 Gma-Chr12 12869711 12871205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01085 6 315 Monolignol Biosynthesis Gene Families AT5G54160 32.344 4.52e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01085 - K16040 gmx:100793263 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01085 12 12869711 12871205 Gma12g01085 12 12869711 12871205 ECH