Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01079 ATGATTTCTAGATCTGAGTTTGCTCGTCTAAACATTCAAGGGTTTTACACCATCGTATTGGAGAAAGAGGATGTGTTAATATCTATAGCATCTATCAGGGTGCATGGAACTATAGTAGGAGAGATGCCTCTAATTGCAACTTGCAGTCAGTATTGTCACCAAGGAATATGTCGACTCCTTGTGAGTGCTATTGAGCAGGTGGAAAAGCTTGTGATGTCAGCCATTCCAGATTTGGTTAAGACGTGGACAAAGGGCTTTGGATTTATACCTGTTGATGACATCGAAAGGCAAATATTGAATAAAACTACCCTGATGGTTTTTCCTGGGACAATGTTACTTGTGAAATCCTTACATTGGAAAGGGATAATTGAAGCTCAAATAGGACTGTGTGATCAATCAACTCTAGCAACAAATGAATCAATCAAAGCAGTCATCTATTATGAAGGAATGACCATTTCTGAATCAATGGCACAAGATGTTGGAAACATAACTACCAACAAAGGTGAAGCAAAGTCAGAACATGAATCTATGGATGGAAAAAATCAATCAAACTATGAAGGAAATATGGTACCATTTCATCACACTGTTGTTAATCAGGGGGGTTTCAGTGATTTGGTTTTAGGTTGTGCACATTGTGGAATGGTTGCTGTTGTTCGATGGATTGCAAAGCTCGCAACTCCTTGTCTCCTTGAAGCACTTGGTCACTACTGA 711 0.3924 MISRSEFARLNIQGFYTIVLEKEDVLISIASIRVHGTIVGEMPLIATCSQYCHQGICRLLVSAIEQVEKLVMSAIPDLVKTWTKGFGFIPVDDIERQILNKTTLMVFPGTMLLVKSLHWKGIIEAQIGLCDQSTLATNESIKAVIYYEGMTISESMAQDVGNITTNKGEAKSEHESMDGKNQSNYEGNMVPFHHTVVNQGGFSDLVLGCAHCGMVAVVRWIAKLATPCLLEALGHY 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01079 236 PANTHER PHD FINGER PROTEIN 12 5 187 IPR042163 GO:0003714|GO:0045892
Gma12g01079 236 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 10 95 IPR016181 -
Gma12g01079 236 PANTHER INCREASED DNA METHYLATION 1 5 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01079 Gma-Chr12 12758445 12759997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01079 5 130 PHD Transcription Factor Family AT3G14980 57.576 2.84e-46 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01079 - - gmx:100795889 299.671