Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01077 ATGCTAAGAAACATGGATGAAGGAGAAATCATGACAAATATTGCTTTCCCTCAGAACTTAACTGCTTCCGCTGCATCCAGTGATCACAACAATCCTCCTCCTTCTTTGAAGAGGAAAAGAAACCTCCCAGGAAACCCAGATCCTGAAGCACAAGTCATAGCCTTATCACCAAAGACCCTGATGGCTACAAACAGGTTCTTGTGTGAAACTTGTGGGAAGGGTTTCCAGAGGGATCAAAATCTCCAACTTCATAGACGTGGACACAACCTTCCATGGAAGCTTAAGCAGAGGACGGGAAAGGAAGCAAGAAAAAGGGTTTATGTGTGCCCTGAGAAGAGTTGTGTCCACCATGACCCTTCAAGGGCTCTTGGAGACTTAACTGGGATAAAGAAACACTTTTGCAGAAAGCACGGTGAGAAGAAGTGGAAGTGCGAGAAGTGCTCGAAGCGTTATGCTGTGCAGTCAGATTGGAAGGCACATTCCAAGACCTGTGGCACCAGAGAATACAAATGTGACTGTGGAACTATCTTTTCAAGCAGGAGAGATAGCTTCATCACACACAGGGCCTTCTGTGATGCATTGGCAGAAGAAACAGCTAGGGTAAATGCAGCATCAGACATAAACACCTCCTTAGGGGGCAACATTGGTTACAACATAATGGGAACATCCCTAGGCCCTAACATGGCAACCCATTTCCCCTCAATTTTCAAGCCAATTTCAAGCACTGATGAAACAAGTAACCAAACATCTAGGGGACTACCCCTTTGGATGGATTCATCAACTTGGTTCTGCCACAAGCTCATCAGGAACAATGTATG 818 0.4548 MLRNMDEGEIMTNIAFPQNLTASAASSDHNNPPPSLKRKRNLPGNPDPEAQVIALSPKTLMATNRFLCETCGKGFQRDQNLQLHRRGHNLPWKLKQRTGKEARKRVYVCPEKSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSSRRDSFITHRAFCDALAEETARVNAASDINTSLGGNIGYNIMGTSLGPNMATHFPSIFKPISSTDETSNQTSRGLPLWMDSSTWFCHKLIRNNV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01077 272 Gene3D Classic Zinc Finger 62 89 - -
Gma12g01077 272 SUPERFAMILY beta-beta-alpha zinc fingers 65 162 IPR036236 -
Gma12g01077 272 PANTHER BNACNNG76910D PROTEIN 9 232 - -
Gma12g01077 272 Gene3D Classic Zinc Finger 99 190 - -
Gma12g01077 272 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 88 IPR013087 -
Gma12g01077 272 MobiDBLite consensus disorder prediction 23 49 - -
Gma12g01077 272 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Gma12g01077 272 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 9 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01077 Gma-Chr12 12694629 12696686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01077 33 224 IDZ Gene Family AT1G03840 83.673 7.79e-118 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma12g01077 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01077 K25870 - gmx:100790620 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01077 12 12694629 12696686 Gma12g01077 12 12694629 12696686 ECH