Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01061 ATGGCTAAATGCCCCACTGAGGTTTCGTTTCAATTCCCAGCAGATCTTAGGATCCTTGCGATTGATGATGACGCCAATATTATAGAAAGGTTAATTTGTCCTTACTACATCTTATATAATGCCCCCACTTGCTCTGAATTATGTCAGAAGAAAAAAGATTGCACTGATGTGATACTCATTGAAACTCACATGTCAAATATGGATGGCTATGAATTTCTTCAGCATGTCACTAAAAAAATTCATGTTCCTGCTATTGCTTATGGAGCTTGTGATTATTGGATTAAACCATTGCATCAGAACCAATTCAAGATTATGTGGATGTGGCAGCATAACAGTTCTAATTCCCAAGAATCTGATCCTGATGTTTGTTATGCTCCCCCTGGAAAGAAGTCTCGTTTAGTATGGCAAGGAGAATTGCATCATCACCAATTTGTCAAGGCTGTGAATGTGATGCAAGTTGGGCTTGATAAGGCACAGCCAAAGAGAACTCTTGAAGTGATGAATATTCCTGGTTTGACAGAAGAGCATGTAGCTAGTCGTTTACAGGATGAGATGTCATTGCCAAACTGTATAGAATCCAGAGGCAGGAATTATCCTTCTTCTTACTTGGATGCTTCCATTCCCTCTCTGTTCCCAAAATTCTCTTTCTACATTCCCAATTCGACTGGTTGCCGACGATGGGGAAAGGAGGCAGCTACGTTCCAGCAAGAAGAAGTCGCCGCCGATCATTGA 732 0.4112 MAKCPTEVSFQFPADLRILAIDDDANIIERLICPYYILYNAPTCSELCQKKKDCTDVILIETHMSNMDGYEFLQHVTKKIHVPAIAYGACDYWIKPLHQNQFKIMWMWQHNSSNSQESDPDVCYAPPGKKSRLVWQGELHHHQFVKAVNVMQVGLDKAQPKRTLEVMNIPGLTEEHVASRLQDEMSLPNCIESRGRNYPSSYLDASIPSLFPKFSFYIPNSTGCRRWGKEAATFQQEEVAADH 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01061 243 SUPERFAMILY Homeodomain-like 128 182 IPR009057 -
Gma12g01061 243 Gene3D - 11 108 - -
Gma12g01061 243 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 12 180 - -
Gma12g01061 243 SUPERFAMILY CheY-like 15 109 IPR011006 -
Gma12g01061 243 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 130 182 IPR006447 GO:0003677
Gma12g01061 243 Gene3D - 128 187 - -
Gma12g01061 243 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 180 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01061 Gma-Chr12 12254162 12257180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01061 12 175 Response Regulator Gene Family AT4G16110 31.092 2.12e-22 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma12g01061 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01061 - K14491 gsj:114399361 164.851