Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01032 ATGAGGATCAGAATTGCTTTGGATGCCTCTCGAGGAATACAATATCTTCATAATTATGCAGATTCATTTATTATTCACGGAGATATCAAGTCTTCCAACATTCTTCTTGATGCCAGTTGGACGGCAAGAGTATCTGATTTTGGATGGAAGTTTATGAGAAACAGACAACGTATAATTGAGAACACTGATCCTAAGTACGTTATTCGAGGTGCATTGTCAGCAGAGAGTGATGTGCATGGGCTTGGAGTTGTACTGTTTGAACTTCTAACAGGAAAGAGACCTACATTCGTGTACGGGGAAGATGGAGGCACCCTATTAAGTAGAAAACATTTGGTAGACTTTGCTGTGACTGCTATTTCAAATGGATTTTTGGAGAAATTTTTGGATCAAAGGGCTGGACAACCCGATGTGAATGAAGCAGAAGCAGTAAAGTTAGTGGCTGATACCGCTATCCGTTGTGTGAATTTGAAACTGAAAGATAGACCAACCATGGCTGACATTGTAGTCAGATTAGAGCGGGCTTTGGCTATTTGTGATTATGATAGCATTTTCAGGGCTTTGGTTTCGAATTGTTAA 576 0.401 MRIRIALDASRGIQYLHNYADSFIIHGDIKSSNILLDASWTARVSDFGWKFMRNRQRIIENTDPKYVIRGALSAESDVHGLGVVLFELLTGKRPTFVYGEDGGTLLSRKHLVDFAVTAISNGFLEKFLDQRAGQPDVNEAEAVKLVADTAIRCVNLKLKDRPTMADIVVRLERALAICDYDSIFRALVSNC 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01032 191 Gene3D Transferase(Phosphotransferase) domain 1 1 182 - -
Gma12g01032 191 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 1 182 IPR044815 GO:0004674
Gma12g01032 191 SUPERFAMILY Protein kinase-like (PK-like) 2 171 IPR011009 -
Gma12g01032 191 Pfam Protein kinase domain 5 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01032 191 ProSiteProfiles Protein kinase domain profile. 1 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01032 191 ProSitePatterns Serine/Threonine protein kinases active-site signature. 24 36 IPR008271 GO:0004672|GO:0006468
Gma12g01032 191 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01032 Gma-Chr12 11661873 11662448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01032 1 189 Receptor kinase-like Gene Family AT3G55950 50.000 1.21e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gma12g01032 Pkinase 2.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01032 - - gmx:121173070 377.096