Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01009 ATGGCGTCTGGATCCTCGGGTCGCGGCAACTCTGCCTCGAAAGGCTTCGATTTCGCTTCCGATGACATCCTCTGCTCCTACGACGACTACGCCAACCGCGATTCCAGTTCCAACGGCAATCACACCGATCCGGATTTTCACAAATCAAGGAGGATGTTTCCCACTACTGCCTATAATCCACCTGAAGATTCTTTGAGCCAAGATGTGATTGCGACTGTAGAGAAGAGTATGAAAAAATATGCTGACAACCTGATGCGGTTTCTTGAGGGAATTAGTTCAAGGCTATCACAATTGGAATTATATTGCTACAATCTTGACAAATCTATTGGAGAAATGAAATGCGATATAAATCGTGACCATGTGGAGCAAGAGTCAAGGCTGAAATCTCTTGAAAAACATGTTCAAGAAGTTCACAGGTCTGTACAAATTTTGAGAGACAAGCAAGAGCTAGCTGAGACTCAGAAAGAATTAGCCAAGCTTCAACTTGCTCAGAAAGAATCATCTTCCTCCAGCCATTCACAGTCCAATGAGGAGAGGTCTTCACCTACCACAGATCCTAAAAAAACTGACAATGCATCTGATGCAAACAACCAGCAGTTGGCTCTTGCTCTGCCTCATCAAATAGCCCCTCAGCCGCAGCCTCCAGCACCCCAGGTTCAGGCTCAGGCTCAGGCTCCCGCACCAAATGTGACTCAAGTCCCTCAACAGCCTCCTTATTACATGCCACCCACCCCTCTGCCAAATCCAGCTGTGCCCCAGCACCCACAGAATCAGTATTTACCATCCGATCAACAATATCGAACACCCCAACACGTGGCTCCACAACCAACACCATCTCAAGTAACCCCATCTCCTGTGCAACAATTTTCTCACTATCAGcagcaacagcaacagccacaacaacagcaaccgcagcagcaacaACAATGGTCACAGCAGGTGCTGCCTTCACAGCCACCTCCAATGCAATCTCAAGTAAGACCTCCCTCTCCAAATGTGTACCCTCCATACCAGCCAAATCAAGCAACAAACCCATCACCTGCAGAAACACTGCCAAACAGCATGGCCATGCAAATGCCATACTCGGGAGTTCCACCACCAGGATCTAGCCGCACCGATGCCATACCTTATGGATATGGAGGAGCTGGCAGAACAGTTCCACAGCAGCCTCCACCCCAGCAGATGAAGAGCTCTTTTCCTGCACCCCCAGCTGACATGTATGGACCTTCCGGGAACCTCCCGGCGCTTCCTCCACCTAGTGGTGCATACATGATGTATGATGGTGAGGGAGGAAGAACACATCATCCACCCCAACCTCATTTTGCTCAACCTGGATATCCCCCAACAAGTGCTTCCCTTCAGAACCCTCCACCAGGTCTTAATCTCATGGTCCGAAATCCGAACCAGTCGCAATTCATCCGCAACCATCCCTACAATGAGTTGATTGAGAAACTGGTGAGCATGGGATTCAGGGGGGATCATGTTGCAAGTGTGATCCAGAGGATGGAGGAGAGTGGACAGGCCATTGATTTCAACTCGGTACTTGACAGGTTGAATGTGCATAGCTCGGTGGGTCCTCAGAGAGGAGGATGGTCAGGGTGA 1602 0.48 MASGSSGRGNSASKGFDFASDDILCSYDDYANRDSSSNGNHTDPDFHKSRRMFPTTAYNPPEDSLSQDVIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMKCDINRDHVEQESRLKSLEKHVQEVHRSVQILRDKQELAETQKELAKLQLAQKESSSSSHSQSNEERSSPTTDPKKTDNASDANNQQLALALPHQIAPQPQPPAPQVQAQAQAPAPNVTQVPQQPPYYMPPTPLPNPAVPQHPQNQYLPSDQQYRTPQHVAPQPTPSQVTPSPVQQFSHYQQQQQQPQQQQPQQQQQWSQQVLPSQPPPMQSQVRPPSPNVYPPYQPNQATNPSPAETLPNSMAMQMPYSGVPPPGSSRTDAIPYGYGGAGRTVPQQPPPQQMKSSFPAPPADMYGPSGNLPALPPPSGAYMMYDGEGGRTHHPPQPHFAQPGYPPTSASLQNPPPGLNLMVRNPNQSQFIRNHPYNELIEKLVSMGFRGDHVASVIQRMEESGQAIDFNSVLDRLNVHSSVGPQRGGWSG 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01009 533 MobiDBLite consensus disorder prediction 160 193 - -
Gma12g01009 533 MobiDBLite consensus disorder prediction 321 342 - -
Gma12g01009 533 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 531 - -
Gma12g01009 533 MobiDBLite consensus disorder prediction 282 320 - -
Gma12g01009 533 MobiDBLite consensus disorder prediction 343 357 - -
Gma12g01009 533 Pfam UBA-like domain (DUF1421) 478 522 IPR010820 -
Gma12g01009 533 MobiDBLite consensus disorder prediction 431 451 - -
Gma12g01009 533 MobiDBLite consensus disorder prediction 30 63 - -
Gma12g01009 533 MobiDBLite consensus disorder prediction 231 254 - -
Gma12g01009 533 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 531 - -
Gma12g01009 533 MobiDBLite consensus disorder prediction 255 275 - -
Gma12g01009 533 MobiDBLite consensus disorder prediction 208 374 - -
Gma12g01009 533 Coils Coil 127 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01009 Gma-Chr12 11225917 11231858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01009 477 518 Trihelix Transcription Factor Family AT3G01560 40.476 7.27e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01009 - - gmx:100810231 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01009 12 11225917 11231858 Gma12g01009 12 11225917 11231858 ECH