Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00980 atgccTCTCTTGTCGGACCCTCCCTTCCTTTGCGCCCATGAGGCCGCCATCGCCGGACTCCTCGACGTCGAGCCACACCACATGCTGGAAAAGGACTACCTTCGCCGTTGCCGCGACCACTCCGTCAACGTCACCACCTGCTTGGACGCCGTCAATTGGATCTTAAAGGTCCACGCATATCACGAGTTTTCCCCAGTAACGGCGTTTCTCTCCGTCAACTATTTTGATCGTTTCCTCTCTTGA 243 0.5473 MPLLSDPPFLCAHEAAIAGLLDVEPHHMLEKDYLRRCRDHSVNVTTCLDAVNWILKVHAYHEFSPVTAFLSVNYFDRFLS 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00980 80 Gene3D - 20 29 - -
Gma12g00980 80 PANTHER CYCLINS 13 80 IPR039361 -
Gma12g00980 80 SUPERFAMILY Cyclin-like 14 80 IPR036915 -
Gma12g00980 80 Gene3D - 30 80 - -
Gma12g00980 80 CDD CYCLIN 49 80 IPR013763 -
Gma12g00980 80 PANTHER CYCLIN-D2-1-LIKE 13 80 - -
Gma12g00980 80 Pfam Cyclin, N-terminal domain 22 80 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00980 Gma-Chr12 10666613 10666916 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00980 16 79 Core Cell Cycle Gene Families AT1G70210 46.875 3.38e-14 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00980 K18810 - gmx:100798996 146.362