Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00975 ATGGGTTGTTGTGTCTCAACAAGCAGTAGGAGTACTTGTAGCAGCAAGAGCAATGGAGACATGGTGTCTCCATCTTGCTTAGAAACTGGATGCTGTGGGCAAAAGAGAACAAGGAGAACATTCTCTGATCATGTTATTTCTCTCCACCATTTACCATCCTTACCTAACAGAATTTTCACCAATGGAAAGAGCCGCAGTTCATGCATATTTACACAGCAGGGCCGCAAGGGTATTAATCAGGATGCAATGATTGTGTGGGAGGATTTCATGTCTGAAGATACTATCTTTTGTGGTGTCTTTGATGGCCATGGTCCACATGGTCATCTAGTTGCGCGCAAAGTGAGGGATGCCTTGCCAACTAAGCTAGTTTCATCTTTGCATTCTAATGAATCGAAGCGAAATGGGTCAGGTAAAACTTGCTTCAAAGGGAATGTAAAACCTGATAGTGGAGACTCTGAGAAGGATTGCTCTGCGGAGGATAAACTGAACTCGACATGGAGGGAAGCTTTCATGAAGGCATACAAGGCTATGGACAAAGAGCTCAGGTCTCATCCGAATCTGGATTGCTTCTGTAGTGGGAGCACTGCTGTGACTATAGTGAAGCAGGGTTCGAATCTGTTCATGGGCTATATCGGGGATTCTCGAGCAATCATGGGATCCAAGGATAGCAATGACTCCATTGTGGCTATTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCAAGGGAAGCAGAGAGAATTAAGAAGTGCAAAGGTAGGGTATTTGCTTTGCAAGATGAGCCTGAAGTGCCTAGGGTGTGGTTGCCCTTTGATGATGCACCAGGATTAGCCATGGCTAGAGCATTTGGAGATTTCTGCTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTTCTCACCGGCAGCTTACGGACAGAGATCAGTTCATTATTCTTGCCTCAGATGGGGTATGGGATGTTTTAAGCAACGAGGAGGTGGTTGAGATAGTATCATCAGCGCCAACGCGATCATCAGCGGCAAGAATTCTGGTAGATTCTGCTGCTAGGGAGTGGAAACTCAAATACCCTACATCAAAGATGGATGACTGTGCTGTAGTATGCTTATTTTTGGATGGGAAAATGGACTCAGAATCTGATTATGAGGAACAAGGCTTTTCTTCTGCAACCATCCAGAGCAACCATTCGGGTAACCCCATTGAGTCAGATGATGGACAAAAGTCTGAGCCATCATTGCAAAGGAACTTCACTGTGAGATCCTCAGAAGAAAATGAGACAAATGGAGCACTATCTGTTGATGTTGTTGAAGATGCAACATCATCAGCTGATGATCAAAACTGGATGAGGTTCCCAAATCCTGGCAGTGGTGATGACACTTTTGTGCCAAATCCTGGTTATGAGGTTCCCATTCCTGGCAGTGGTGGAAGTGTTCCAGCACCAGCTGCTCCATGA 1449 0.4507 MGCCVSTSSRSTCSSKSNGDMVSPSCLETGCCGQKRTRRTFSDHVISLHHLPSLPNRIFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMSEDTIFCGVFDGHGPHGHLVARKVRDALPTKLVSSLHSNESKRNGSGKTCFKGNVKPDSGDSEKDCSAEDKLNSTWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAIMGSKDSNDSIVAIQLTVDLKPDLPREAERIKKCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRQLTDRDQFIILASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYEEQGFSSATIQSNHSGNPIESDDGQKSEPSLQRNFTVRSSEENETNGALSVDVVEDATSSADDQNWMRFPNPGSGDDTFVPNPGYEVPIPGSGGSVPAPAAP 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00975 482 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 448 - -
Gma12g00975 482 MobiDBLite consensus disorder prediction 381 427 - -
Gma12g00975 482 CDD PP2Cc 65 370 IPR001932 -
Gma12g00975 482 MobiDBLite consensus disorder prediction 1 21 - -
Gma12g00975 482 MobiDBLite consensus disorder prediction 380 457 - -
Gma12g00975 482 Pfam Protein phosphatase 2C 92 347 IPR001932 -
Gma12g00975 482 SMART PP2C_4 50 368 IPR001932 -
Gma12g00975 482 MobiDBLite consensus disorder prediction 125 157 - -
Gma12g00975 482 SUPERFAMILY PP2C-like 58 372 IPR036457 -
Gma12g00975 482 Gene3D - 57 372 IPR036457 -
Gma12g00975 482 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Gma12g00975 482 PANTHER ALPHABET, ISOFORM E-RELATED 1 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00975 Gma-Chr12 10459938 10468563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00975 1 446 PP2C-type Phosphatase Gene Family AT1G03590 69.248 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00975 - - gmx:100798340 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00975 12 10459938 10468563 Gma12g00975 12 10459938 10468563 ECH
Gma12g00975 12 10459938 10468563 Gma06g02648 06 49973748 49979416 GST
Gma13g02650 13 41243812 41246423 Gma12g00975 12 10459938 10468563 PCT
Gma12g01910 12 39731100 39734195 Gma12g00975 12 10459938 10468563 PCT
Gma12g00975 12 10459938 10468563 Gma13g02650 13 41243812 41246423 PCT
Gma12g00975 12 10459938 10468563 Gma12g01910 12 39731100 39734195 PCT