Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00968 ATGGGTTGGAAGAGATCTGGTTTGGAGTGGGAGAGAGTGAAGATCTATGGACAAGTTCTATTGGGATTTCTGTATATCTGCACAATTCAGACTTCAAGTGCAGTCACTGATCCCACTGATGTTGCTGCAATTAATAGCTTATATATTGCATTGCGATCCCCTGTTCTGCCTGGGTGGGTTGCTAGTGGTGGAGATCCATGTGGAGAAGGGTGGCAAGGCATTCTGTGTAATGGATCATTCATACAAAAAATAGTTCTAAATGGTGCAAATTTGGGAGGAGAACTGGGAGATAAACTGTCAACTTTTGTTTCAATCTCAGTAATTGATCTAAGCAGCAACAACATTGGAGGAAATATTCCATCCAGTTTGCCAGTTACCTTGAGAAACTTTTTTCTTGCAGCCAACCAGTTCACTGGAAGTATTCCGACCTCTTTATCCACTTTGACTGGACTGACAGACATGTCTCTTAATGAGAACTTTTTAACTGGAGAAATACCAGATGCTTTTCAGTCACTTACACAATTGATCAATCTAGATTTATCTCATAATAATTTGAGTGGGGAATTGCCTCCTTCTATGGATAATTTGTTGGCTCTGACCACCCTACGCTTACAGAACAATCAACTTTCTGGGACACTTGATGTTTTGCAAGACCTTCCTCTGAAAGATTTGAATGTTGAGAACAACCAGTTTGCTGGCCCAATACCTCCAAAATTGCTAAGCATCCCTGCCTTCAGACAAGCTGGAAACCCATTCAATGTTAATGGTACTACAACTCCTGCTTCTTCACCTCGCTCCCCAGCAATAgcaccaccaggaactcctatttctggggcaccacccggaactcctgtttctgggacaccGCCATCTTCTGGTCGTGTACCTACTAAACAGGCTGATGGACCAACTGCAGTAAATGAATCACATACTGGGAAATCCAAAAAATCCACAAAAAGGGTGGTTTGGATATCTATTGCTAGTGTGTTGGGATTCATTATTTTGTTACTAGGATTTATTCTCTTTATTCCAAGGTGTAGCAGAAGAGAACGGGATGACAGAAGGTCCAAGCAACATCAAATTGGTGCATATGGAGGTGAAAGACAAAATGCTAGGGATTATGAGGCTTTAGTCCAACCACCTAGTCAAATGGAAAAAGTACCAGTAGGGGATGTTCCAAAGCCAAAAGAGGGTCATCAAGCAGAGAGCAGGAGAACTTGGGTTACTCCAAATCCACAGGGTGAGCAAGAGAAGGATGTGCATAGAAATAGAATGGCAACAATACCAAAGCCAGTAGAGCATGAGATAGATACGAGTACTCTAGAAGTATATTCAATgcctcctcctccccctccccctcccccgcctccacccccgcctccacctccacctcctcctcctACTGAGAAGGTGATTATTGAGCCAGCCTCATCCCGCAGTGGGACTAATGTCAATCCTGTGAATCCATCCATTAGAAGTTCAGTTCCTCCTCCCACTTTTGCAAAATTTTTCGCCATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGAAAATCTTATAGGAGGAGGCATGTTGGGTAATGTGTATAGAGCAGAGCTTCCTAATGGAAAGTTGCTTGCTGTAAAGAAACTGGACAAGAGAGCCTCTGCACACCAGAAGGATGATGAATTTATTGAATTGATAAATAATATTGACAAAATACGGCATGCAAATGTTGTTGAGCTTGTTGGATACTGTTCAGAGCATGATCAAAGGCTTCTAATCTATGAGTACTGCAGTAATGGATCACTGTATGATGCACTCCACTCAGATGATGACTTCAAAACAAGACTCTCATGGAATTCTCGTATTCGGATCTCACTTGGGGCAGCTAGAGCCTTAGAATATCTGCATGAGCAATGTCAGCCACCTGTAGTACATAGAAATTTGAAGTCTGCCAATATTCTCCTTGATGATGATCTATCCGTGCGGGTCTCTGACTGTGGTCTAGCTCCATTAATAGCTTCGGGATCAGTCAGTCAGCTCTCGGGGAACCTGTTAACTGCCTATGGCTATGGAGCGCCAGAATTTGAGTCTGGAATTTACACATACCAAAGTGATGTGTACAGCTTTGGAGTGATCATGTTAGAACTTTTGACTGGCCGTCAATCGCACGATAGGGCACGAGCACGAGGGGAGCAATTTCTGGTCAGATGGGCAGTTCCCCAACTTCATGATATCGATGCATTATCAAGGATGGTTGATCCTTCATTAAATGGAAATTACCCAGCAAAATCATTGTCAAATTTTGCAGACATTATCTCTAGATGCCTTCAGTCTGAGCCAGAATTTAGGCCAGCAATGTCCGAGGTCGTCCTATACTTACTAAATATGATGAGGAAGGAGTCTCAGCAAAGTGAATCAAATGAAAAATGA 2421 0.3974 MGWKRSGLEWERVKIYGQVLLGFLYICTIQTSSAVTDPTDVAAINSLYIALRSPVLPGWVASGGDPCGEGWQGILCNGSFIQKIVLNGANLGGELGDKLSTFVSISVIDLSSNNIGGNIPSSLPVTLRNFFLAANQFTGSIPTSLSTLTGLTDMSLNENFLTGEIPDAFQSLTQLINLDLSHNNLSGELPPSMDNLLALTTLRLQNNQLSGTLDVLQDLPLKDLNVENNQFAGPIPPKLLSIPAFRQAGNPFNVNGTTTPASSPRSPAIAPPGTPISGAPPGTPVSGTPPSSGRVPTKQADGPTAVNESHTGKSKKSTKRVVWISIASVLGFIILLLGFILFIPRCSRRERDDRRSKQHQIGAYGGERQNARDYEALVQPPSQMEKVPVGDVPKPKEGHQAESRRTWVTPNPQGEQEKDVHRNRMATIPKPVEHEIDTSTLEVYSMPPPPPPPPPPPPPPPPPPPPPTEKVIIEPASSRSGTNVNPVNPSIRSSVPPPTFAKFFAIASLQQYTNSFSQENLIGGGMLGNVYRAELPNGKLLAVKKLDKRASAHQKDDEFIELINNIDKIRHANVVELVGYCSEHDQRLLIYEYCSNGSLYDALHSDDDFKTRLSWNSRIRISLGAARALEYLHEQCQPPVVHRNLKSANILLDDDLSVRVSDCGLAPLIASGSVSQLSGNLLTAYGYGAPEFESGIYTYQSDVYSFGVIMLELLTGRQSHDRARARGEQFLVRWAVPQLHDIDALSRMVDPSLNGNYPAKSLSNFADIISRCLQSEPEFRPAMSEVVLYLLNMMRKESQQSESNEK 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00968 806 MobiDBLite consensus disorder prediction 288 311 - -
Gma12g00968 806 PANTHER OS01G0253100 PROTEIN 25 805 IPR045271 GO:0004714|GO:0006468
Gma12g00968 806 MobiDBLite consensus disorder prediction 251 317 - -
Gma12g00968 806 Gene3D Phosphorylase Kinase; domain 1 490 593 - -
Gma12g00968 806 SUPERFAMILY L domain-like 57 242 - -
Gma12g00968 806 MobiDBLite consensus disorder prediction 265 287 - -
Gma12g00968 806 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 25 805 - -
Gma12g00968 806 SUPERFAMILY Formin homology 2 domain (FH2 domain) 457 466 - -
Gma12g00968 806 MobiDBLite consensus disorder prediction 442 473 - -
Gma12g00968 806 MobiDBLite consensus disorder prediction 349 424 - -
Gma12g00968 806 MobiDBLite consensus disorder prediction 444 471 - -
Gma12g00968 806 SUPERFAMILY Protein kinase-like (PK-like) 493 790 IPR011009 -
Gma12g00968 806 Pfam Protein tyrosine and serine/threonine kinase 519 788 IPR001245 GO:0004672|GO:0006468
Gma12g00968 806 Gene3D Ribonuclease Inhibitor 39 257 IPR032675 -
Gma12g00968 806 Pfam Leucine rich repeat 126 185 IPR001611 GO:0005515
Gma12g00968 806 Gene3D Transferase(Phosphotransferase) domain 1 594 806 - -
Gma12g00968 806 ProSiteProfiles Protein kinase domain profile. 516 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00968 Gma-Chr12 10101471 10108530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00968 32 801 Strubbelig Receptor Gene Family AT4G03390 60.279 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gma12g00968 PK_Tyr_Ser-Thr 5.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00968 - - ahf:112737625 1150.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00968 12 10101471 10108530 Gma12g00968 12 10101471 10108530 ECH
Gma12g00968 12 10101471 10108530 Gma06g02653 06 50053146 50060013 GST
Gma13g02656 13 41298571 41306081 Gma12g00968 12 10101471 10108530 PCT
Gma12g01904 12 39662975 39669156 Gma12g00968 12 10101471 10108530 PCT
Gma12g00968 12 10101471 10108530 Gma13g02656 13 41298571 41306081 PCT
Gma12g00968 12 10101471 10108530 Gma12g01904 12 39662975 39669156 PCT