LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma12g00955	ATGACAGTTGGTTCCTTCTTCATCAGGACCTCCAGGGTTCTCAACTCCTCCAACTTTCTGCTTCTCTGCACTCTCAGTGGTGGTGGTGTAGTGGCATACTCAGAATCACAATCAGGAGCTGAACGTCCTAGTATTGAAGCTAATGAGCCTGCCAAAAAGAAAGTGGTGGTTCTTGGAACAGGATGGGCTGCTACCAGTTTCCTTAAGGATCTGGATGCTTCATTATATGATGTTCAAGTTGTTTCACCTCGTAACTACTTTGCATTTACTCCCTTATTACCCAGTGTCACTTGTGGGACAGTTGAAGCACGGAGCATTGTAGAGCCGGTCCGAAACATCATTAAAAAGAGAAAAGGAGAAGTGAATTTTTGGGAGGCAGAATGTGTCAAGATTGATTATTCGAACAAAAAGGTTTTCTGTCGGTCCAATATTGACAACTTGGTGGGAAGTAACGAATTTTCCTTGGACTATGACTTCTTGGTTGTAGCAGTAGGAGCACAAGTAAACACTTTTAACACCCCTGGTGTCAAGGAGAACTGTCATTTTCTGAAGGATGTTGAGGATGCTCAGAAGATTAGACTGTCTGTGATTGATTGCTTTGAGAAGGCTGTTCTTCCTAGTCTATCTGATGATGAGCGAAGGTCAAATCTTCATTTTGTAGTTGTTGGAGGAGGTCCAACTGGTGTGGAATTTGCAGCCGAGCTGCATGATTATGTCCAAGAAGATCTAATCAAACTATATCCAACTGTTAAAGATAAAGTGAAAATAACATTGATTCAATCTGGAGATCATATCTTGAACATGTTTGATGAAAGAATAAGTTCATTTGCGGAGCAAAAGTTTACAAGAGATGGGGTAGAAGTTCAAACAGGATGCCGGGTTGTCGCTGTTAATGACAAGGATATTACAGTGAAGGTGAAATCAACGGGAGATGTTTGCTCGGTGCCCCATGGGTTGATTGTTTGGTCAACTGGTATTTCAACTCTTCCAGTTATAAGGGACTTTATGGAAGAAATTGGTCAGACTAAAAGGCATGTACTAGCAACTAATGAATGGTTGCGTGTGAATGGATGTGAAGATGTGTATGCCATTGGTGACTGTTCTAGCATAACTCAACGTAAAATCATGGATGATATCACAGCCATATTTGAGGCTGCAGACAAAAATAACTCCGGCACCTTAACTATTGAAGAATTCCAGGAGGTGATGGATGACATTATCTTAAGATATCCACAAGTTGAGCAATATCTAAAGCAGAAGCATCTGCGTGATTTTACCACTCTGTGGAAAGATTTGCAAGGGAATGAAAGCAAGGAAATAGACATCCAAGCGTTTAAGCTGGCCCTTTCTCATGCAGATTCACAGGTGAAGAGTCTGCCAGCAACTGCTCAGGTTGCTGCCCAACAGGGTGCATATCTAGCTAGGTGCTTTAATCGCAGGGATCATACTGAAGAGAATCCTGAAGGTCCTCGACGATTTAGCGGATCTGGACGTCATAGGTTTCTCCCCTTCCGGTATAGGCATTTGGGGCAATTTGCTCCACTGGGTGGGGAGCAGGCAGCTGCAGAACTTCCTGGAGACTGGGTTTCCATGGGTCACAGCACTCAATGGCTTTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGCACCAGGGTCTTGGTCATGTCTGATTGGACAAGAAGATTCATATTTGGCAGGGATTCAAGTAGAGTTTAA	1722	0.4321	MTVGSFFIRTSRVLNSSNFLLLCTLSGGGVVAYSESQSGAERPSIEANEPAKKKVVVLGTGWAATSFLKDLDASLYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGEVNFWEAECVKIDYSNKKVFCRSNIDNLVGSNEFSLDYDFLVVAVGAQVNTFNTPGVKENCHFLKDVEDAQKIRLSVIDCFEKAVLPSLSDDERRSNLHFVVVGGGPTGVEFAAELHDYVQEDLIKLYPTVKDKVKITLIQSGDHILNMFDERISSFAEQKFTRDGVEVQTGCRVVAVNDKDITVKVKSTGDVCSVPHGLIVWSTGISTLPVIRDFMEEIGQTKRHVLATNEWLRVNGCEDVYAIGDCSSITQRKIMDDITAIFEAADKNNSGTLTIEEFQEVMDDIILRYPQVEQYLKQKHLRDFTTLWKDLQGNESKEIDIQAFKLALSHADSQVKSLPATAQVAAQQGAYLARCFNRRDHTEENPEGPRRFSGSGRHRFLPFRYRHLGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRVLVMSDWTRRFIFGRDSSRV	573

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gma12g00955	573	ProSiteProfiles	EF-hand calcium-binding domain profile.	374	409	IPR002048	GO:0005509
Gma12g00955	573	Pfam	Pyridine nucleotide-disulphide oxidoreductase	53	379	IPR023753	GO:0016491
Gma12g00955	573	Gene3D	-	43	429	-	-
Gma12g00955	573	Gene3D	-	441	573	-	-
Gma12g00955	573	PANTHER	EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B1, MITOCHONDRIAL	48	573	-	-
Gma12g00955	573	Pfam	EF hand	379	404	IPR002048	GO:0005509
Gma12g00955	573	PRINTS	FAD-dependent pyridine nucleotide reductase signature	23	42	-	-
Gma12g00955	573	PRINTS	FAD-dependent pyridine nucleotide reductase signature	157	175	-	-
Gma12g00955	573	PRINTS	FAD-dependent pyridine nucleotide reductase signature	218	236	-	-
Gma12g00955	573	SUPERFAMILY	EF-hand	332	457	IPR011992	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma12g00955	Gma-Chr12	9969150	9974886	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma12g00955	5	573	Chloroplast and Mitochondria Gene Families	AT4G21490	64.360	0.0	754

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma12g00955	K03885		-	gmx:100793566	1154.04

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma12g00955	12	9969150	9974886	Gma12g00955	12	9969150	9974886	ECH
	Gma12g00955	12	9969150	9974886	Gma06g02663	06	50171582	50174993	GST

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