Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00948 ATGTTCAAGTTGGCAGAGTACCGCGCCGTGCTGAAGCAGCTAAAGGCCGCGACGGTGACGGAGGTGCTGCTGATGGAGGAGATCCCCTGGGCGACATTCAACGTCGTGGAGTGCCTCTCGTGTTTGTTTGCGACTGGGTGGTGGGCGCCCGTGCGGTCGGAGCACCTGCCTGACGACGAGGTGGATCGCCTGATCAGGAAGCTTCCGAGGACGCTCTTGGAAAGGTTACTACCTTTCCAGCATGATGGGTTGAGGTTCGCGTTGAGAAGAGGTGCAAGGTGCCTCATTGCCGATGATATGGGCCTCGGGAAGATGCTACAGCTAATAAAACTAAATCTACAGCTTGATGCAAAAGGTTCTTATGTGGAAGTATTGGAAAGGTATGTCAATTTGGGGCCTATTGTTGACTTCCATGTGGTAGACCTCGAAAGGCAGGGCCAAGGACACAAGTACTGCATACTGGGCAGGTTGTCATCTGAAGTTGGATGGAACTTATTTGATATCATCAGGGAGCTAGAAAAGAAGAGAAAGGACAAGGCACAATTGGTTTATGAGAGAAAGAAGCATCTCAACAATTTAAGGGTGAAAGCCGAGAAGGTTGCTGAAGACAAGCTCGCTACAGTTTGTGGTCTTGCACTAACTATGGATATTTGTGGCTCACAGCCTTATTGGTAG 675 0.5007 MFKLAEYRAVLKQLKAATVTEVLLMEEIPWATFNVVECLSCLFATGWWAPVRSEHLPDDEVDRLIRKLPRTLLERLLPFQHDGLRFALRRGARCLIADDMGLGKMLQLIKLNLQLDAKGSYVEVLERYVNLGPIVDFHVVDLERQGQGHKYCILGRLSSEVGWNLFDIIRELEKKRKDKAQLVYERKKHLNNLRVKAEKVAEDKLATVCGLALTMDICGSQPYW 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00948 224 Gene3D - 131 153 IPR015943 GO:0005515
Gma12g00948 224 Gene3D - 107 130 IPR015943 GO:0005515
Gma12g00948 224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 118 IPR027417 -
Gma12g00948 224 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 3 109 - -
Gma12g00948 224 Gene3D - 167 210 - -
Gma12g00948 224 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 3 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00948 Gma-Chr12 9860050 9863684 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00948 148 207 Cytoplasmic Ribosomal Protein Gene Family AT5G48760 75.000 1.68e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00948 K25861 - gmx:100788690 191.43