Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00926 ATGGTAAACACCAAGGGAGAGACCAGAAGGATAATTATCCTTAACTGGTGTTCTAGTCACATGTTGTCTATCTTCATCTTATACTCATTCTTTTTCACTTTTAGTTTCAAGCATTGCTCAGCAACAGATACTATAAGTATAACCATTAACAACTTCTTGCAAGATGGGGGAGGGGATACTCTAGTTTCAAAAGGTGAAAATTTTGAGCTAGGATTTTTCACTCCTAATGGAAGCTCTAGTGGGAAAAGATATTTGGGAATATGGTACTACAAGTTGACTCCACTAACAGTTGTGTGGGTTGCTAACCGAGACAAACCACTTCTAGATTCTTGTGGTGCTTTTGGCATAGCAGAAGATGGAAATCTAAAGGTTTTAGACAAAAGTGGGAAATTCTACTGGGGCACAAACCTTGAAGGATCACATTCACAACACAGAATAGTTATGCTAATGGACAATGGGAACCTTGTTGTTAGTGATGAAGTTGAAGACCAAGGAAACCATCAAGTGAAGATTTTGTGGCAGAGTTTTGCTAATCCAACAGACACATTTCTCCCAGGCATGAAAATGGATGACAATTTAGCATTAACTTCATGGAGAAGTTATGAAGATCCTGCACCAGGGAACTTCTCTTTTGAGCATGATCAAGGGGAGAACCAGTATATAATATGGAAAAGGTCCATAAGGTATTGGAAAAGCAGCGTTTCAGGTAAGTTTGTTGGAACTGGTGAGATTTCTACAGCAATATCTTACTTTTTGTCTAATTTCACCTTGAAAGTGTCCCCAAACAACACTGTTCCCTTCCTCACTTCAGCACTTTATACTGACACAAGGTTGGTCATGACTCACTGGGGTCAACTCAAGTACATGAAGATGGATTCGGAGAAAATGTGGTTGTTGGTTTGGGGTGAGCCAAGAGATAGATGCAGTGTGTTCAATGCCTGTGGAAACTTTGGAAGCTGCAATAGCAAGTATGATTCCATGTGCAAGTGCTTGCCAGGGTTCAAGCCTAATTCCATTGAGAGTTGGAATGCCGGAGACTTTTCGGGTGGATGCAGCAGGAAAACAAATGTGTGCAGTGGGGATGCCAAGGGTGACACATTTTTGAGCTTGAAAATGATGAAAGTAGGGAACCCTGATGCTCAATTTAATGCCAAGGATGAAGAGGAATGCATGTCAGAGTGCCTCAACAATTGCCAGTGTTATGCTTATTCCTATGAAGACACTGAAAAGGGAAGGTTGGGTGATAGTGGGGATGTAGTTTGCTGGATTTGGTCTGAGGACTTGAACAATCTTGAAGAAGAGTATGAGGATGGGTGTGACCTGCATGTTCGTGTCGCAGTTTCTGATATAGAATCCACTGGGAGAAATTGTGGGACCTGTGGTACAAACTTCATTCCATATCCCCTTAGCACAGGACCAAGTTGTGGTGATCCCATGTACTTCAGTTTTCACTGCAATATCTCCACTGGTGAGCTTGACTTTGAGACTCCTGGGGGCACATATCAAGTGATAAGCATAAACCCAGAAGCACAAAAATTCTTGATCCACAGAAAGAATGTACTTAACTGTGATCAAAGTTCAAGGGATAAGTTTCTGCCTCTCAACAAGTCGTTTCCGTTTCATCTTACCAGTAATTGCTATGCTGATCCAAGCATTTTTAGTTCTAATGCTCCCATGAAACATGGAGTAGAAATAGAATTGAGTTGGGAGCAACCATTAGAGCCTATTTGCTCTTCATTGTTGGACTGCAAGGAGTGGCCAAATTCAACTTGCAACACTTCCAGTGATGGCAAGAAGAGGTGCCTTTGCAACACAAACTTTCTTTGGGATGGATTGAAGTTAAATTGTACTCTAGaaggaaatCATAGCTATCAACCAGAAAGGCAACTGTCCTTACCTAAGATCATTGTAATTACTTTAACAACTGTGATTGGCTTGATTCTTCTCTCAACTACTAGCACATGTGTTTACTTGAGGAAAAGGAGACAGGCCAAACCACAAGATAGCAGGGGATATGTTCAGAAAAACTCAGGGATTAACTTGTATGACAGTGAGAGATATGTAAGAGACTTGATTGAATCCAGTAGGTTCAAAGAAGATGATGCACAGGCCATAGATATTCCATATTTCCATTTGGAAAGCATACTTGATGCTACTAATAACTTTGCAAATACAAACAAGCTTGGACAAGGAGGGTTTGGTCCTGTCTACAAGGGAAAGTTCCCTGGAGGGCAAGAAATAGCAGTGAAGAGACTTTCAAGTTGTTCTGGACAAGGTTTAGAGGAGTTTAAAAATGAGGTTGTGTTGATTGCCAAGCTTCAACATAGAAACCTAGTTAGACTTTTGGGTTACTGTGTGGAAGGAGATGAAAAGATGCTAGTATATGAATATATGCCAAATAGAAGCTTGGATGCTTTCATTTTTGACCGGAAGCTGTGTGTTCTATTAGACTGGGATGTGCGCTTCAAGATTATTTTGGGGATTGCTCGAGGGCTCCTTTATCtacatgaagattctaggttgaggattattcatagggacttgaaaacaagcaacattctactagatgaagagaagaatcctaaaatctcagactttggcttagccaggatatttggaggaaaagagacagtagccaacacagaaagagtggttggaacttatgggtatatgtctccagaatatgcacttgatggacatttttcagtcaagtctgatgtctttagctttggtgttgttgtacttgagattattagtggaaaaaggaacacaggattttatcaagcagatcatgaattgagtcttctaggatatGCATGGCTTTTGTGGAAAGAAGGAAAGGCGTTGGAGTTCATGGACCAGACACTATGTCAAACATGCAATGCAGATGAATGCTTGAAATGTGTGATTGTGGGGCTCTTGTGCTTACAAGAAGATCCAAATGAACGCCCCACAATGTCAAATGTAGTTTTCATGCTTGGTAGTGAATTCAACACTCTTCCAAGTCCTAAGGAACCAGCCTTTGTTATCAGGAGATGCCCTTCGAGTAGAGCATCTACTTCAAGTAAATTAGAAACCTTTTCACGTAATGAATTGACAGTCACTATAGAACATGGCAGGTAG 3123 0.3692 MVNTKGETRRIIILNWCSSHMLSIFILYSFFFTFSFKHCSATDTISITINNFLQDGGGDTLVSKGENFELGFFTPNGSSSGKRYLGIWYYKLTPLTVVWVANRDKPLLDSCGAFGIAEDGNLKVLDKSGKFYWGTNLEGSHSQHRIVMLMDNGNLVVSDEVEDQGNHQVKILWQSFANPTDTFLPGMKMDDNLALTSWRSYEDPAPGNFSFEHDQGENQYIIWKRSIRYWKSSVSGKFVGTGEISTAISYFLSNFTLKVSPNNTVPFLTSALYTDTRLVMTHWGQLKYMKMDSEKMWLLVWGEPRDRCSVFNACGNFGSCNSKYDSMCKCLPGFKPNSIESWNAGDFSGGCSRKTNVCSGDAKGDTFLSLKMMKVGNPDAQFNAKDEEECMSECLNNCQCYAYSYEDTEKGRLGDSGDVVCWIWSEDLNNLEEEYEDGCDLHVRVAVSDIESTGRNCGTCGTNFIPYPLSTGPSCGDPMYFSFHCNISTGELDFETPGGTYQVISINPEAQKFLIHRKNVLNCDQSSRDKFLPLNKSFPFHLTSNCYADPSIFSSNAPMKHGVEIELSWEQPLEPICSSLLDCKEWPNSTCNTSSDGKKRCLCNTNFLWDGLKLNCTLEGNHSYQPERQLSLPKIIVITLTTVIGLILLSTTSTCVYLRKRRQAKPQDSRGYVQKNSGINLYDSERYVRDLIESSRFKEDDAQAIDIPYFHLESILDATNNFANTNKLGQGGFGPVYKGKFPGGQEIAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCVEGDEKMLVYEYMPNRSLDAFIFDRKLCVLLDWDVRFKIILGIARGLLYLHEDSRLRIIHRDLKTSNILLDEEKNPKISDFGLARIFGGKETVANTERVVGTYGYMSPEYALDGHFSVKSDVFSFGVVVLEIISGKRNTGFYQADHELSLLGYAWLLWKEGKALEFMDQTLCQTCNADECLKCVIVGLLCLQEDPNERPTMSNVVFMLGSEFNTLPSPKEPAFVIRRCPSSRASTSSKLETFSRNELTVTIEHGR 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00926 1040 Pfam PAN-like domain 361 430 IPR003609 -
Gma12g00926 1040 SMART ntp_6 362 445 IPR003609 -
Gma12g00926 1040 ProSiteProfiles EGF-like domain profile. 304 340 IPR000742 -
Gma12g00926 1040 ProSiteProfiles PAN/Apple domain profile. 358 439 IPR003609 -
Gma12g00926 1040 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 37 1037 - -
Gma12g00926 1040 SUPERFAMILY Protein kinase-like (PK-like) 704 993 IPR011009 -
Gma12g00926 1040 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 37 1037 - -
Gma12g00926 1040 SUPERFAMILY alpha-D-mannose-specific plant lectins 97 203 IPR036426 -
Gma12g00926 1040 ProSiteProfiles Protein kinase domain profile. 722 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00926 1040 Pfam D-mannose binding lectin 96 193 IPR001480 -
Gma12g00926 1040 Pfam S-locus glycoprotein domain 236 337 IPR000858 GO:0048544
Gma12g00926 1040 Gene3D - 41 178 IPR036426 -
Gma12g00926 1040 CDD STKc_IRAK 728 993 - -
Gma12g00926 1040 SMART serkin_6 722 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00926 1040 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Gma12g00926 1040 CDD B_lectin 56 179 IPR001480 -
Gma12g00926 1040 ProSiteProfiles Bulb-type lectin domain profile. 46 170 IPR001480 -
Gma12g00926 1040 Pfam Protein tyrosine and serine/threonine kinase 725 991 IPR001245 GO:0004672|GO:0006468
Gma12g00926 1040 SMART blect_4 52 179 IPR001480 -
Gma12g00926 1040 CDD PAN_AP_plant 358 446 - -
Gma12g00926 1040 Gene3D Transferase(Phosphotransferase) domain 1 798 1000 - -
Gma12g00926 1040 Gene3D Phosphorylase Kinase; domain 1 685 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00926 Gma-Chr12 9429249 9434258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00926 715 1011 Receptor kinase-like Gene Family AT4G23230 60.606 5.71e-122 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma12g00926 PK_Tyr_Ser-Thr 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00926 - - gmx:100775297 2117.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00926 12 9429249 9434258 Gma12g00926 12 9429249 9434258 ECH
Gma13g02687 13 41578465 41583366 Gma12g00926 12 9429249 9434258 PCT
Gma12g01870 12 39350933 39355041 Gma12g00926 12 9429249 9434258 PCT
Gma12g00926 12 9429249 9434258 Gma12g01868 12 39326212 39330402 PCT