Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00916 ATGGAATTTACAAGACGCAGCTATGCGGTTGTTTATGTCATTCTCCTTTGTGCGTTGGCCCAAGGGGGCTCAGAGGGGAAGGGGGGGAAGGAAGAGGAAATTTCTATAGATGGTGGAGGAGCTTTCTCATCATCCATTTATGTTCATGGAATTAAGGTTGAAAATGAGTTGAAACATTGCAGGAAAGAATTGATAGAGAGGAACAATGATGTCAAAACTAGTACTTCTCCTGCTCCAGTTTCAGAAAAGGGTAGCTCTAGATATTTATTGACAAAGCATTCTGGATCAACCTTGGGTGTGGAAAGTGGTCATGGCAGAAATTTGATTGCTGATTCACCACATAATGCACCAAGCCCTTCTGCTACTGCTGAATCACCAAGTCATGGTCCAACACCAACAAGTtctccatcatcaccatctcaatcatcaccaactccaAGTCCAAAAGGTGTGGATTTACCACTCCCTCCAAATATGTTTGTGCCATTTCCACCATCACCCCGTGTACCTCATCCTCCTCCTCAAAATTTTCGACCTATAGTATATGCTCCTGTTCCTTCACCACCTAACAATGAAAACAAAAAGAAGCAAACAATTATTTTAGCCGCCGCTTTATCAGGAATTATAATCTTGATAGGCTTGGCCCTCTGCTATCGTGAAGCAAGTCGCAACAAAGGTGACAGAGATGACAGGCCTTTGCTCGTATTAACCTCAAGTGATTATTCTGGTGGATCAAAGAAGGTTGTTCGATTGGGAGATGCTGACAAGGAAGAATCTGACATTGGCAATGGAAAGAAGCCTTCTAATTTTAGAAATTGGTCCATTAAGGGTGGACATAACAATGGCTCACTGGTTGAGACAACAGCATCAGAAGGTGTAGGACAAGTTCCAATGCCTCCTAATGGAAAGCCTGCCCCTCCACCTCCACCTCCCAGACCACCACCACCACCGGCTCCAAAGCCGCCACCGCCTCCTGCTCCTCGTGCACCGCCACCTCCAAAAGGTGCTCATCCTCCACCTGCTCCTCCTAAACCAATGGGAGGTAAAAATCAAGGTCCACTACTTGCTAAAGAAGGAACTTCAAGTGATGGTGATGCTCCAAAACCAAAACTAAAGCCATTTTTCTGGGATAAGGTTAATGCAAAACCTGACCAATCAATGGTGTGGCATGAGATCAGAGCAGGATCATTCGTGATCAATGAGGAAATGATGGAGTCTTTGTTTGGCTGCACCAACCAGAATAAAAATGAACCTAAAAAAAATTCACCACATGTTGATACTTCAGTGCATTATATTCAGATTATTGACCCTAAGAAAGCACAGAACTTATCAATTCTTTTGCGAGCTCTGAATGTGACAACAGAAGAAGTTATTGATGCTCTTAAAGAAGGTAATGAGATTCCAGTGGAGCTCATTCAGACGTTGTTGAAGATGGCACCTACAACAGATGAGGAATTGAAGCTAAGGCTATTCACAGGACAACTCTCAGAACTAGGCCCGGCAGAGAGGTTTCTCAAATTGTTGGTTGACATTCCATTCGCTTTCAAACGTCTTGAATCTCTCATGTTCATGTTTATGCTTAAAGAAGACTTCTCAAGCATTAAGGACTCCTTTGCCACATTAGAGGTTGCATGCCACGAACTCAGAAAAAGCAGGCTATTCCTCAAACTACTCGAAGCAGTTCTCAAAACCGGCAACCGCATGAACGACGGAACCTACCGTGGAGGCGCACAGGCATTCAGGCTCGACACCCTCCTCAAACTCTCCGACGTAAAAGGAACAGACAGCAAGACAACACTCCTGCACTTCGTCGTCCAAGAAATCATCCGCTCCGAGGGAATAAGAGCCGTGCGAACAGAAAGAGCGAGCAGAAGCATCTCTAGCGTCGGAACCGATTCCGACGAAGGAACCGAGGAGTCCGAGGAGCATTACCGCAGCCTCGGACTCCAGGTGATCTCCGGGCTCAGCAATGAGCTCGGAGACGTGAAAAAGGCCGCGCTTATAGACGGGGATGCGCTAAGCAGCTCCGTCTCTAAGCTTGGCTACTCCATGGTGAAGACTCAAGAATTCTTGGACAGGGACATGAAGAGCATTGAGGAAGAGAGTGAGTTCCAGCATTGCATGGAGAGTTTCATGGTGAGAGCGAGGGAGGAAGTGACGTGGCTGGTGGATGAAGAGAAGAGGATAATGGCTTTGGTTAAGAGCACTGCGGACTACTTTCACGGGAACGCGGGGAAGGACGAAGGGCTACGTTTGTTCTTGATCGTGCGTGATTTCTTGACCATATTGGACAAGGTTTGCAGAGAGGTGAGCGAGTCCACCGTGAACTTAGCCAAGGCTGCAAGCAATAGCGCCAAAGAAGCGACTAGGAGTTCGGTTTCTTCTTCCCAAAACTCCACAACTCCGCCTGTTGATCTTCATAGAAGGCTGTTTCCGGCCATTGCGGAGAGGAGAGTAGATTACTCTAGCTCTGACGAGGATGAAGAATTTTAA 2493 0.4585 MEFTRRSYAVVYVILLCALAQGGSEGKGGKEEEISIDGGGAFSSSIYVHGIKVENELKHCRKELIERNNDVKTSTSPAPVSEKGSSRYLLTKHSGSTLGVESGHGRNLIADSPHNAPSPSATAESPSHGPTPTSSPSSPSQSSPTPSPKGVDLPLPPNMFVPFPPSPRVPHPPPQNFRPIVYAPVPSPPNNENKKKQTIILAAALSGIIILIGLALCYREASRNKGDRDDRPLLVLTSSDYSGGSKKVVRLGDADKEESDIGNGKKPSNFRNWSIKGGHNNGSLVETTASEGVGQVPMPPNGKPAPPPPPPRPPPPPAPKPPPPPAPRAPPPPKGAHPPPAPPKPMGGKNQGPLLAKEGTSSDGDAPKPKLKPFFWDKVNAKPDQSMVWHEIRAGSFVINEEMMESLFGCTNQNKNEPKKNSPHVDTSVHYIQIIDPKKAQNLSILLRALNVTTEEVIDALKEGNEIPVELIQTLLKMAPTTDEELKLRLFTGQLSELGPAERFLKLLVDIPFAFKRLESLMFMFMLKEDFSSIKDSFATLEVACHELRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDSKTTLLHFVVQEIIRSEGIRAVRTERASRSISSVGTDSDEGTEESEEHYRSLGLQVISGLSNELGDVKKAALIDGDALSSSVSKLGYSMVKTQEFLDRDMKSIEEESEFQHCMESFMVRAREEVTWLVDEEKRIMALVKSTADYFHGNAGKDEGLRLFLIVRDFLTILDKVCREVSESTVNLAKAASNSAKEATRSSVSSSQNSTTPPVDLHRRLFPAIAERRVDYSSSDEDEEF 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00916 830 PANTHER FORMIN-RELATED 1 828 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma12g00916 830 PANTHER FORMIN-LIKE PROTEIN 1 828 - -
Gma12g00916 830 SMART it6_source 361 778 IPR015425 -
Gma12g00916 830 MobiDBLite consensus disorder prediction 780 808 - -
Gma12g00916 830 SUPERFAMILY Formin homology 2 domain (FH2 domain) 431 776 - -
Gma12g00916 830 MobiDBLite consensus disorder prediction 780 804 - -
Gma12g00916 830 MobiDBLite consensus disorder prediction 137 159 - -
Gma12g00916 830 PRINTS Proline rich extensin signature 111 123 - -
Gma12g00916 830 PRINTS Proline rich extensin signature 132 148 - -
Gma12g00916 830 PRINTS Proline rich extensin signature 155 167 - -
Gma12g00916 830 PRINTS Proline rich extensin signature 168 189 - -
Gma12g00916 830 PRINTS Proline rich extensin signature 304 329 - -
Gma12g00916 830 MobiDBLite consensus disorder prediction 265 290 - -
Gma12g00916 830 MobiDBLite consensus disorder prediction 224 369 - -
Gma12g00916 830 Gene3D Formin, FH2 domain 367 800 IPR042201 -
Gma12g00916 830 MobiDBLite consensus disorder prediction 249 264 - -
Gma12g00916 830 MobiDBLite consensus disorder prediction 70 101 - -
Gma12g00916 830 MobiDBLite consensus disorder prediction 113 136 - -
Gma12g00916 830 ProSiteProfiles Formin homology-2 (FH2) domain profile. 361 789 IPR015425 -
Gma12g00916 830 MobiDBLite consensus disorder prediction 299 347 - -
Gma12g00916 830 MobiDBLite consensus disorder prediction 68 159 - -
Gma12g00916 830 Pfam Formin Homology 2 Domain 365 763 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00916 Gma-Chr12 9299885 9304957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00916 335 770 FH2 protein (formin) Gene Family AT3G05470 47.856 1.39e-120 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00916 - - gmx:100816477 946.421