Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00902 ATGGGTAGCCAGAGTTGCTTCAAGGCTTTGATTATTTGCCTTATAGCATTAATTGGATCAACTCAAGCTCAATTGCAGCTTGGTTTCTATGCCAAAAGTTGTCCAAAGGCCGAGAAAATAATTTTGAAGTATGTTGTAGAGCATATCCGCAATGCTCCATCACTAGCAGCTGCTCTCATAAGAATGCACTTCCATGATTGTTTTGTCAATGGTTGTGATGGATCAGTGCTTGTGGACTCAACACCAGGCAATCAAGCTGAAAAGGACTCTATTCCAAATCTTACACTCCGAGGCTTTGGTTTCATTGACGCAATAAAGAGGCTTGTTGAAGCTGAATGCCCTGGGGTAGTCTCTTGTGCTGATATCTTGGCCTTGACCGCCAGAGACTCTATTCATGCCACTGGTGGACCCTATTGGAATGTTCCAACAGGACGAAGGGATGGGCTCATCTCTAGAGCAGCAGATCCGTTACGCAGCCTGCCTGCTCCATTTCACAACCTCACTACCCAACTAACACTCTTTGGCAATGTTGGACTTGATGCAAACGACCTTGTCTTGCTTGTTGGTGCTCACACAATTGGTGTTGCCCATTGTTCATCAATTGCAACTCGTCTATACAATTTCACTGGCAAGGGTGACATAGACCCAACACTAGACAGTGAATATGCAAAAAATATCAAAACTTTTAAGTGTAAGAACATCAATGATAATACAATTATTGAGATGGATCCTGGAAGTCGCGATACATTTGATCTTGGATTTTATAAACAAGTTGTTAAGAGAAGGGGCTTGTTTCAGTCAGATGCTGAATTTCTTACTAGTCCTATCACAAGGTCTATTATCGATAGACAACTTCAATCAACTCAAGGATTCTTTGAGGAATTTGCCAAGTCTATCGAGAAAATGGGACGAATTAATGTCAAGCTTGGAACTGAAGGGGAGATAAGGAAACATTGTGCACGAGTTAATAACTAA 975 0.4174 MGSQSCFKALIICLIALIGSTQAQLQLGFYAKSCPKAEKIILKYVVEHIRNAPSLAAALIRMHFHDCFVNGCDGSVLVDSTPGNQAEKDSIPNLTLRGFGFIDAIKRLVEAECPGVVSCADILALTARDSIHATGGPYWNVPTGRRDGLISRAADPLRSLPAPFHNLTTQLTLFGNVGLDANDLVLLVGAHTIGVAHCSSIATRLYNFTGKGDIDPTLDSEYAKNIKTFKCKNINDNTIIEMDPGSRDTFDLGFYKQVVKRRGLFQSDAEFLTSPITRSIIDRQLQSTQGFFEEFAKSIEKMGRINVKLGTEGEIRKHCARVNN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00902 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g00902 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g00902 324 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g00902 324 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g00902 324 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g00902 324 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g00902 324 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g00902 324 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g00902 324 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g00902 324 SUPERFAMILY Heme-dependent peroxidases 24 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma12g00902 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Gma12g00902 324 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Gma12g00902 324 PANTHER PEROXIDASE 3 323 - -
Gma12g00902 324 PANTHER PEROXIDASE 25-RELATED 3 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma12g00902 324 CDD secretory_peroxidase 24 322 IPR033905 GO:0004601|GO:0042744
Gma12g00902 324 Gene3D Peroxidase, domain 2 161 302 - -
Gma12g00902 324 ProSiteProfiles Plant heme peroxidase family profile. 24 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g00902 324 Gene3D - 28 323 - -
Gma12g00902 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g00902 324 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g00902 324 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g00902 324 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g00902 324 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g00902 324 Pfam Peroxidase 47 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00902 Gma-Chr12 9065042 9067576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00902 14 324 Peroxidase AT1G05260 64.537 2.24e-151 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00902 K00430 - gmx:100784922 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00902 12 9065042 9067576 Gma12g00902 12 9065042 9067576 ECH
Gma12g00902 12 9065042 9067576 Gma06g02701 06 50675851 50678406 GST
Gma13g02718 13 41793882 41795396 Gma12g00902 12 9065042 9067576 PCT
Gma12g01844 12 39115418 39117696 Gma12g00902 12 9065042 9067576 PCT
Gma12g00902 12 9065042 9067576 Gma13g02718 13 41793882 41795396 PCT
Gma12g00902 12 9065042 9067576 Gma12g01844 12 39115418 39117696 PCT