Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00898 ATGACTGACATAGATCGCTCCTCTGATAATGTTTCTTCTGATTCTATTGAGAAATCAAGCCAAGTTTCTGATGTTGAATTTTCTGAAGCTGAGGAAATCCTTATTGCCATGGTGTATAATCTGGTTGGAGAAAGGTGGTCTTTGATTGCTGGAAGAATTCCTGGAAGAACTGCAGAAGAAATAGAGAAATATTGGACTTCAAGATTTTCGACTAGCCAATGA 222 0.3784 MTDIDRSSDNVSSDSIEKSSQVSDVEFSEAEEILIAMVYNLVGERWSLIAGRIPGRTAEEIEKYWTSRFSTSQ 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00898 73 CDD SANT 26 65 IPR001005 -
Gma12g00898 73 SMART sant 23 71 IPR001005 -
Gma12g00898 73 MobiDBLite consensus disorder prediction 1 25 - -
Gma12g00898 73 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Gma12g00898 73 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 14 72 - -
Gma12g00898 73 Gene3D - 26 69 - -
Gma12g00898 73 Pfam Myb-like DNA-binding domain 26 66 IPR001005 -
Gma12g00898 73 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 73 IPR017930 -
Gma12g00898 73 PANTHER TRANSCRIPTION FACTOR TRY-LIKE 14 72 - -
Gma12g00898 73 SUPERFAMILY Homeodomain-like 26 69 IPR009057 -
Gma12g00898 73 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00898 Gma-Chr12 8956430 8957607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00898 19 70 MYB Transcription Factor Family AT5G14750 46.154 5.41e-13 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma12g00898 Myb_DNA-binding 1.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00898 - - gmx:100500494 144.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00898 12 8956430 8957607 Gma06g02703 06 50700165 50701792 GST