Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00875 ATGGGGTGGATAAAGGCAGCAATTGGAGATGCAATTTTGACATCAATGTGGGTTTTCATAATCTCAACATTAAGGATTGTCACAACTGAGATAACAGTTTTCCTTGGCCTCCAACCATTTTTCCTTGCAGGTCTCATAATCAGCACCATCCTAAACTCCATCTATGTCCTCACCATAAGCTTCATTGGAAGAATCTTAGGTGGTGTCAGCTTCAACCCTTCAACAAGTCTTTCTTTCTACACTGCAGGGTTGAGGCCTGACTCATCCCTTTCATCAATGGCAGTGAGGTTCCCTGCACAGGCATATGGTGGTGCTGTTGGCATCAAAACCCTTCTTCTAGTGATGCCATCTCACTACAAGGACATGCTGAAGGGACCTTTCTTGAAGGTGGACTTGCATTCTGGTGCTGTTGCTGAAGGGCTGTTGACTTTCATTCACAACATGGCTATCTTCTTTGTCATGTTTAAGGGTCCTAGGAACCCTTTTGTGAAGGTGTATTTGCTCTCTGTGACTACTGCTGCTTTGGCTATTCTTGGAGGTGGCTTCACTGGGCCTTCCATGAACCCTGCCAATGCCTTTGGATGGGCCTTTGTCAACAACAAGCACAACACTTGGGAGCAATTTTATGTCTATTGGATTGGTCCCTTCATAGGGGCTTCCTCAGCTGCTTTGATTTTCAGGTCTATGTTTATGCCACCAATCAAGCAGAAGAAAGCTTGA 720 0.4514 MGWIKAAIGDAILTSMWVFIISTLRIVTTEITVFLGLQPFFLAGLIISTILNSIYVLTISFIGRILGGVSFNPSTSLSFYTAGLRPDSSLSSMAVRFPAQAYGGAVGIKTLLLVMPSHYKDMLKGPFLKVDLHSGAVAEGLLTFIHNMAIFFVMFKGPRNPFVKVYLLSVTTAALAILGGGFTGPSMNPANAFGWAFVNNKHNTWEQFYVYWIGPFIGASSAALIFRSMFMPPIKQKKA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00875 239 Pfam Major intrinsic protein 4 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma12g00875 239 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 239 - -
Gma12g00875 239 SUPERFAMILY Aquaporin-like 3 234 IPR023271 -
Gma12g00875 239 Gene3D Glycerol uptake facilitator protein. 1 238 IPR023271 -
Gma12g00875 239 PANTHER AQUAPORIN SIP1-1 1 239 IPR044222 GO:0015250
Gma12g00875 239 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma12g00875 239 PRINTS Major intrinsic protein family signature 52 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma12g00875 239 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma12g00875 239 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00875 Gma-Chr12 8548414 8549248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00875 1 230 Major Intrinsic Protein MIP AT3G04090 44.783 1.20e-56 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00875 K09875 - gmx:100775829 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00875 12 8548414 8549248 Gma06g02723 06 51040065 51040784 GST