Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00867 ATGATTAGACGTGGTGGGCTATCCATGGATTCAGATCCAATTGGGAGCTTCTTCCTCCATAAGCCAATTGTTCTCAACTCTTTCTCAGCTGAAGACACAAACAACCACAACCCCGAGTGGAAAAAACTCAGTCTTCACAACAACAACATGGATGCCACAGTTACCACAAAAGACTACACCATCCCCTTCCGAATCAACCTTAGCTGTTCTTCTGCAGACAATCATGATGATGTCTCTTCACCAACATCTCTCCGTAGCAGAACCGAGATGGACTTCTTCTCCAACAAGAACAGTACCAAAGATGATGACAACAACATCGTTGCTGCGGCTGGTTCTGCCTCTCTCCCCGACAATGATCATCATTCCATCTCTCCACCCACGTTGGATTTAAAAGTAAACACTTGTCTGAATCTTCTTACTACCAATGCTAGTAGCGATCAATCTATGGTGGAAGATGAGATATCACCCAATTCAGAAGACAAAGAAACTAAGAAAGAGATGGCTGATCTTCAAGGTGATCTTGAgagaatcaaaagggagaatcaaaagTTGAGGGACACGCTTGATGAGGTTAACACCAACTACAACGCGCTTCAGATGCACTTTATGAATATGATGCAGGAGCGGAAGGGCGAGGAAGGTGAAGATCAGCAAGAAGTGTCTGATGGCAAGGTTAAAGAGAAGAAGCAGGGTCAGAGTGGTGGTGGGGTATTGGTGTCAAGGCAGTTTATGGATCTTGGGTTGGCTAGCGCTGATATTGAACCCTCATCTTCATCAGGGGGAATAAGAAGTCAAGATAGATCAGGATCACCCAACATAGATGTGGCTTCCAAGGGATTAGGGACTAGTAACAATGATGGGAATAATAGTGTTAATGATGAAGAAGAGAAGGAGTATGATAGAGGGATTGAGAGCGAAGATAGTCCTTCAGGGCATGCTGATAAAGTTCCAAGGTTCAGTAGTCCTTCAAAGAATAATAATGTTGATCAGGCTGAGGCTGAGGCTACTATGAGGAAGGCAAGAGTTTCTGTTAGAGCTCGATCCGAAGCACCCATGATTACTGATGGGTGTCAATGGAGAAAGTACGGGCAGAAGATGGCCAAAGGAAACCCATGTCCTAGAGCTTATTATAGATGTACCATGGCTGCTGGTTGCCCAGTTAGAAAACAGGTACAAAGGTGTGCTGAAGACCGAACAGTCCTTATCACAACCTATGAAGGAAATCACAACCATCCTTTGCCTCCAACAGCAATGGCAATGGCACAAACCACATCCTCAGCAGCAAGAATGTTGCTTTCTGGATCCATGTCAAGTGCTGACAGCATAATGAATGCAGACTTCCTCACAAGGACACTCCTTCCTTGCTCTTCAAGCATGGCCACTATCTCAGCATCTGCTCCATTCCCAACAGTTACATTAGACCTAACTCATTCTCCAAACCCTCTACAGTTCCCAAGGCAGCAGCATCCAAACCAGTTGCAAATTGGTGTCCCTCAGAATTTTGCAAACTCCCCATCATCTTTAATGCCTCAGATATTCGGACAAGCACTTTACAACCAATCAAAGTTTTCTGGCCTACAAATGTCATCACATGATACAGCAGACCCTTCTTCACAATTTGGTTACCAACCTCATCAAGTTCCACCACACCTTGCTGACACAGTTGGTGCTGCCATTGCTACTGATCCCAATTTCACTTCAGCATTGGCAGCTGCTATCACTTCCATCATTGGTGGTGCTcagcaacaacacagcaacattaataataatagtaacaataatgtcaacatgacagccaacatcaacaatggcaatggcaacagcaatggcaacggaaagcaataa 1845 0.4184 MIRRGGLSMDSDPIGSFFLHKPIVLNSFSAEDTNNHNPEWKKLSLHNNNMDATVTTKDYTIPFRINLSCSSADNHDDVSSPTSLRSRTEMDFFSNKNSTKDDDNNIVAAAGSASLPDNDHHSISPPTLDLKVNTCLNLLTTNASSDQSMVEDEISPNSEDKETKKEMADLQGDLERIKRENQKLRDTLDEVNTNYNALQMHFMNMMQERKGEEGEDQQEVSDGKVKEKKQGQSGGGVLVSRQFMDLGLASADIEPSSSSGGIRSQDRSGSPNIDVASKGLGTSNNDGNNSVNDEEEKEYDRGIESEDSPSGHADKVPRFSSPSKNNNVDQAEAEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTVLITTYEGNHNHPLPPTAMAMAQTTSSAARMLLSGSMSSADSIMNADFLTRTLLPCSSSMATISASAPFPTVTLDLTHSPNPLQFPRQQHPNQLQIGVPQNFANSPSSLMPQIFGQALYNQSKFSGLQMSSHDTADPSSQFGYQPHQVPPHLADTVGAAIATDPNFTSALAAAITSIIGGAQQQHSNINNNSNNNVNMTANINNGNGNSNGNGKQ 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00867 614 Coils Coil 160 201 - -
Gma12g00867 614 Gene3D WRKY domain 338 415 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma12g00867 614 MobiDBLite consensus disorder prediction 252 289 - -
Gma12g00867 614 SUPERFAMILY WRKY DNA-binding domain 346 414 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma12g00867 614 MobiDBLite consensus disorder prediction 209 229 - -
Gma12g00867 614 SMART WRKY_cls 353 413 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma12g00867 614 MobiDBLite consensus disorder prediction 145 165 - -
Gma12g00867 614 ProSiteProfiles WRKY domain profile. 348 414 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma12g00867 614 PANTHER OS05G0567200 PROTEIN 59 604 - -
Gma12g00867 614 MobiDBLite consensus disorder prediction 290 313 - -
Gma12g00867 614 MobiDBLite consensus disorder prediction 587 614 - -
Gma12g00867 614 MobiDBLite consensus disorder prediction 251 333 - -
Gma12g00867 614 MobiDBLite consensus disorder prediction 209 238 - -
Gma12g00867 614 Pfam WRKY DNA -binding domain 355 412 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma12g00867 614 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 59 604 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00867 Gma-Chr12 8420446 8423957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00867 89 592 WRKY Transcription Factor Family AT1G62300 48.456 4.13e-125 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma12g00867 WRKY 4.6e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00867 12 8420446 8423957 Gma12g00867 12 8420446 8423957 ECH
Gma12g00867 12 8420446 8423957 Gma15g01036 15 8727729 8730417 ECH
Gma12g00867 12 8420446 8423957 Gma07g02529 07 47619028 47622264 ECH
Gma12g00867 12 8420446 8423957 Gma06g02731 06 51097118 51100456 GST
Gma13g02744 13 42051388 42054331 Gma12g00867 12 8420446 8423957 PCT
Gma12g00867 12 8420446 8423957 Gma13g02744 13 42051388 42054331 PCT