Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00860 ATGTTCAACGGTATGATGGATCCCGATTTGATGAAGATCGCTCAGGAGCAGATGAGTCGCATGTCACCCGCTGAGTTGGCTCGGATCCAACAACAGGCGATCAATGTTAATTGTGGTGTTGTGCGATGTTTCTTGGGATTGCAGATGATGTCTAATCCAGAGCTGATGAGGATGGCCTCGGAGAGCATGAAGAACATGAGTGCTGAAGACTTTAAACTTGCTGCAGAGCAATTAAAGCATACCCGTCCGGAAGAAATGGCCGAGATTGGTGAGAAGGTGGCTAATGCGAGTCCTGAGGAAGTGGCAGCGATGCGATCCCGGGTTGATGCCCAGATCAAATATCAGTTGAGTGCGGCTGAGATGTTGAAGAAGCAGGGAAATGATCTTCATAATCAAGGAAGGTACAATGATGCTTTGAAGAAGTATATGCTTGCTAAGGAAAACATTAAAGAGGTACCATCTTTCCAGAGTAGAAAGCTTCTTTTGGCATGCTCTCTGAACTTGATGTCCTGTTACTTGAAGACAAGCCAGTATAATGAATGCATAAAAGAAGGTTCTGAGGTTTTGGCATATGATGCGAAGAACCTTAAGGCTCTTTATCGAAGAGGTCAAGCTTATAAGGAACTGGGTCTACTAAAAGATGCTGTTTCTGATCTGAGCATGGCACTTGAAGTGTCCCCTGATGATGATACAATTACAGAGCTTTTACGGGATACCAAGGAAAAATTGGCAATGGAAGGTGGTGAGCATGCACCTAGAAGAATAGTAACTGAAGAAATAACTGAAGTTGAGGATGTTCCTTCTGGAAGCTCTTTGAAACAATCGGTGGTTCAACTAAAAAAATCTGGTGACTCCTCTAAGAGTTACAGTACAGCCAACAATGGAATTCCAAAAACAAAGACAGACAGTTTAGATGCATTGAAAAAAGATCCTGAAGCTGTCAGATCATTCCAAAACTTTATTTCAAATACCGATCCTGCCACACTGGCTTCTTTGAATGCTGGACAATTCAAAGATGTGTCTCCAGATATGATTAAAACTACCTCTGATATGGTTAGTAAAATGTCACCTGAGGAACTTCAAAGAATGCTTGACATGGCTTCTTCATTTCAAGGGGATAATCCAATTTTTAGAGGAGGTTCCCCTGATTCTTCTTTCAACCCTGGATCAATGCCTCCAAATGTGACACCTGATATGTTTAAAGCAGCAAGTGATATGATTAGTAAAATGCCAGCAGATGACCTTAAGAGGATGTTTGAAATGGCATCCTCACTGAAAGGGAAAGAATCTACTCCATTAGCAGCAGCAGTAGATGAGAATGAAAGAAATGTTTCCCGGTCAAACTTACCATCATCAAGTACTAATGGAACTACTGCTTTTGGAGAATCAAGTTCTCATAATGTGTTTTCAAATATGAGAAATGCTTCTCAGTCAAACTTCCCTTCCTCAAGTGCCAATCTCCAAGAACAGATGAGAAACCAGATGAAAGATCCAGCTATGCGGAAGATGTTCACATCCATGGTTAAAAATATGAGCCCGGAAATGATGGCTAACATGGGTGAACAATTTGGTGTTAAGCTTTCACCAGAAGAAGCTGCAAAAGCTCAGCAAGCCATGTCATCCTTATCACCGGAGAGCTTGGATAAAATGATGCTTTGGGCAGACAGGATTCAAAGAGGAGTTGAATCTGCGAGAAAGACAAAGAACTGGCTGCTAGGGAAACCTGGCATGATCTTTGCTATATTAATGCTCATTTTGGCTGTCATTCTTCACCGGTTAGGCTTCATTGGTGGCTAG 1797 0.4201 MFNGMMDPDLMKIAQEQMSRMSPAELARIQQQAINVNCGVVRCFLGLQMMSNPELMRMASESMKNMSAEDFKLAAEQLKHTRPEEMAEIGEKVANASPEEVAAMRSRVDAQIKYQLSAAEMLKKQGNDLHNQGRYNDALKKYMLAKENIKEVPSFQSRKLLLACSLNLMSCYLKTSQYNECIKEGSEVLAYDAKNLKALYRRGQAYKELGLLKDAVSDLSMALEVSPDDDTITELLRDTKEKLAMEGGEHAPRRIVTEEITEVEDVPSGSSLKQSVVQLKKSGDSSKSYSTANNGIPKTKTDSLDALKKDPEAVRSFQNFISNTDPATLASLNAGQFKDVSPDMIKTTSDMVSKMSPEELQRMLDMASSFQGDNPIFRGGSPDSSFNPGSMPPNVTPDMFKAASDMISKMPADDLKRMFEMASSLKGKESTPLAAAVDENERNVSRSNLPSSSTNGTTAFGESSSHNVFSNMRNASQSNFPSSSANLQEQMRNQMKDPAMRKMFTSMVKNMSPEMMANMGEQFGVKLSPEEAAKAQQAMSSLSPESLDKMMLWADRIQRGVESARKTKNWLLGKPGMIFAILMLILAVILHRLGFIGG 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00860 598 MobiDBLite consensus disorder prediction 427 466 - -
Gma12g00860 598 MobiDBLite consensus disorder prediction 283 300 - -
Gma12g00860 598 PANTHER OUTER ENVELOPE PROTEIN 61 73 597 - -
Gma12g00860 598 MobiDBLite consensus disorder prediction 441 466 - -
Gma12g00860 598 Gene3D Tetratricopeptide repeat domain 105 250 IPR011990 GO:0005515
Gma12g00860 598 SUPERFAMILY TPR-like 112 242 IPR011990 GO:0005515
Gma12g00860 598 SMART tpr_5 119 152 IPR019734 GO:0005515
Gma12g00860 598 SMART tpr_5 162 195 IPR019734 GO:0005515
Gma12g00860 598 SMART tpr_5 196 229 IPR019734 GO:0005515
Gma12g00860 598 MobiDBLite consensus disorder prediction 283 303 - -
Gma12g00860 598 ProSiteProfiles TPR repeat profile. 196 229 IPR019734 GO:0005515
Gma12g00860 598 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 73 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00860 Gma-Chr12 8314811 8319739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00860 109 243 Calmodulin-binding Proteins AT5G48570 34.752 1.35e-15 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00860 - - gmx:100793234 1110.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00860 12 8314811 8319739 Gma06g02736 06 51148905 51153992 GST