Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00849 ATGGACGTTGATTCCTCGATGGTGCCGGAGCCCGATCACGATCCGCCGGTGCAGAACCATGCCGAGAGAGACCAGCTAGGAGAGTCACCGTCGCCGCCGTCGTCGGAGGGAGGCGGATCTCCGGCGCAACCGCAGCAACAGCCGCTGCCGCCGACGGCGGCTCAGGTGCAACAGCCCAATCCGCTGGTTGGTCCGAGGCTCGCGCCGACTTACTCAGTGGTGAATGCGATTTTGGAGAAGAAGGAGGACGGGCCGGGGCCGCGGTGCGGCCACACGTTGACGGCGGTGGCGGCGGTTGGAGAGGAGGGGACGCCGGGGTACATTGGCCCGAGGCTGATTTTGTTCGGCGGTGCCACTGCGCTTGAAGGGAATTCCGCGGTCTCAGGGACTCCTTCATCTGCTGGAAATGCTGGCATACGTTTAGCTGGTGCCACTGCTGATATCCACTGTTATGATGTCATAACTAATAAATGGTCTAGGATAACTCCCATTGGCGAGCCTCCATCCTCAAGGGCTGCACATGTGGCAACTGCTGTTGGAACCATGGTAGTTATTCAGGGTGGCATTGGCCCTGCTGGTTTGTCTGCAGAGGACCTTCATGTTCTTGATCTCACTCAGCAACGGCCACGATGGCATAGAGTTGGTGTTCCTGGCCCTGGACCAGGGCCACGCTATGGACATGTTATGGCTTTGGTGGGGCAGAGGTATCTCATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCACCTCCATGCATGTATGCAACTGCCAGTGCACGCTCTGATGGGCTTCTTCTGCTTTGTGGAGGGAGGGACGCCAATAGTGTTCCATTGTCAAGTGCATATGGACTTGCTAAGCATAGAGATGGTCGCTGGGAATGGGCTATTGCTCCTGGTGTGTCACCATCTCCTAGATATCAGCATGCAGCGGTATTTGTTAATGCAAGGCTCCATGTGTCTGGTGGGGCCCTTGGAGGAGGACGCATGGTTGAAGATTCATCGAGTGTTGCAGTGTTGGACACTGCTGCTGGTGTTTGGTGTGATACCAAATCTGTTGTTACCAGTCCAAGAACGGGTAGATACAGTGCTGATGCAGCAGGTGGAGATGCTGCAGTTGAGTTGACACGGCGTTGTAGGCATGCGGCTGCTGCTATTGGTGACTTAATTTTTATTTATGGTGGTTTACGTGGTGGTGTCTTGCTGGATGACCTACTTGTTGCTGAAGATCTTGCTGCTGCTGAAACAACTGCTGCTTCACATGCTGCTGCAGCAGCAGCAGCATCTAATGTACAGGCCGGACGGCTACCTGGACGGTATGGATTTATTGATGATAGGACAAGGCAAACCATGCCTGAAACAGATCCTGATGGTTCAGTAGTTTTGGGAAATCCAGTTGCCCCCCCTGTAAATGGCGACATGTATACTGATATCAGCACTGAAAATGCCTTGCTCCCGGGATCTAGGCGAACGAGCAAAGGAGTTGAGTATCTAGTTGAAGCATCAGCTGCAGAAGCTGAAGCTATCAGTGCCACACTGGCTGCTGCTAAGGCACGGCAAGTGAACGGTGAAGTTGAATTGCCTGACCGAGACCGTGGGGCTGAGGCAACACCTAGCGGGAAACAAATATCTTCCTTGATTAAGCCTGATTCTGCTGGGTCAAATAGCATTCCTCCTGGTGGAGTGAGGCTGCATCACAGAGCTGTGGTTGTTGCTGCAGAGACTGGCGGAGCATTAGGTGGCATGGTTAGACAGCTTTCAATTGACCAGTTTGAGAATGAAGGCAGGCGGGTCAGTTATGGGACTCCTGAAAGTACAACAGCTGCTAGAAAATTATTAGACCGGCAGATGTCTATCAATAGTGTCCCAAAAAAGGTTGTAGCTCACCTTTTAAAGCCTCGTGGCTGGAAACCACCAGTTCGTCGACAGTTTTTCTTGGACTGCAATGAAATTGCAGATCTTTGTGATAGTGCAGAACGCATATTTTCAAGTGAACCGAGCGTGTTACAGCTTAGGGCTCCAATTAAAATATTTGGTGATTTACATGGGCAATTTGGAGATCTCATGCGCCTCTTTGATGAGTATGGTGCACCATCAACTGCTGGTGACATAGCATACATTGACTATCTATTCCTCGGAGATTATGTTGATAGGGGCCAACACAGCCTGGAAACTATCAGCCTTCTGCTTGCTCTGAAGGTTGAGTATCCAAACAATGTACATTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTCCGAATTGAGTGCATTGAGAGGATGGGTGAGAGAGATGGAATTTGGACATGGCACCGTATAAACCGTCTGTTTAATTGGCTTCCTCTGGCTGCCCTAATTGAGAAAAAAATTATTTGCATGCATGGGGGTATTGGCCGTTCAATAAATCATGTGGAACAAATTGAAAATATTCAGCGTCCAATTACGATGGAAGCAGGATCAATTGTGCTTATGGATCTATTATGGTCTGATCCTACGGAGAATGACAGTGTTGAAGGGCTGCGGCCAAATGCTAGGGGTCCAGGATTAGTCACTTTTGGGCCTGATCGAGTAATGGAATTTTGCAACAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCCCAGGGGCATTTGATCACACTTTTCTCTGCTACAAACTACTGTGGTACGGCAAATAATGCTGGGGCAATATTAGTTTTGGGTAGAGATCTCGTTGTGGTTCCTAAATTGATTCATCCATTACCGCCTGCAATTTCTTCACCAGAAACGTCACCGGAACGTCATATTGAGGATACATGGATGCAGGAGTTGAATGCTAACAGACCACCAACACCAACTAGAGGCCGTCCTCAAGTAACAAACGACCGAGGGTATTCGAGCTTACCCGCTGAAAGCTTCAAGGATCAAGCTTTTATTTGTCCCGGTTCTCATCGCTCAATCATCTGGCCTGTAGACGATACAAGTTCGAGAAGCAAGCAAAGTTGGTAG 3105 0.4982 MDVDSSMVPEPDHDPPVQNHAERDQLGESPSPPSSEGGGSPAQPQQQPLPPTAAQVQQPNPLVGPRLAPTYSVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAVSGTPSSAGNAGIRLAGATADIHCYDVITNKWSRITPIGEPPSSRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAASHAAAAAAASNVQAGRLPGRYGFIDDRTRQTMPETDPDGSVVLGNPVAPPVNGDMYTDISTENALLPGSRRTSKGVEYLVEASAAEAEAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSAGSNSIPPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESTTAARKLLDRQMSINSVPKKVVAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQVTNDRGYSSLPAESFKDQAFICPGSHRSIIWPVDDTSSRSKQSW 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00849 1034 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 995 - -
Gma12g00849 1034 Pfam Galactose oxidase, central domain 223 276 - -
Gma12g00849 1034 ProSitePatterns Serine/threonine specific protein phosphatases signature. 767 772 IPR006186 GO:0016787
Gma12g00849 1034 SMART pp2a_7 670 954 IPR006186 GO:0016787
Gma12g00849 1034 Pfam Calcineurin-like phosphoesterase 698 905 IPR004843 GO:0016787
Gma12g00849 1034 Pfam Kelch motif 329 375 IPR011498 GO:0005515
Gma12g00849 1034 MobiDBLite consensus disorder prediction 1 56 - -
Gma12g00849 1034 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 995 - -
Gma12g00849 1034 MobiDBLite consensus disorder prediction 24 56 - -
Gma12g00849 1034 SUPERFAMILY Kelch motif 142 432 IPR015915 GO:0005515
Gma12g00849 1034 MobiDBLite consensus disorder prediction 562 576 - -
Gma12g00849 1034 MobiDBLite consensus disorder prediction 548 578 - -
Gma12g00849 1034 CDD MPP_Bsu1_C 650 952 IPR041758 -
Gma12g00849 1034 PIRSF STPPP_BSU1 38 1000 IPR012391 GO:0004721|GO:0009742
Gma12g00849 1034 Gene3D - 266 454 IPR015915 GO:0005515
Gma12g00849 1034 PRINTS Serine/threonine phosphatase family signature 698 725 IPR006186 GO:0016787
Gma12g00849 1034 PRINTS Serine/threonine phosphatase family signature 733 760 IPR006186 GO:0016787
Gma12g00849 1034 PRINTS Serine/threonine phosphatase family signature 766 790 IPR006186 GO:0016787
Gma12g00849 1034 PRINTS Serine/threonine phosphatase family signature 804 830 IPR006186 GO:0016787
Gma12g00849 1034 PRINTS Serine/threonine phosphatase family signature 834 861 IPR006186 GO:0016787
Gma12g00849 1034 PRINTS Serine/threonine phosphatase family signature 894 914 IPR006186 GO:0016787
Gma12g00849 1034 PRINTS Serine/threonine phosphatase family signature 916 932 IPR006186 GO:0016787
Gma12g00849 1034 Gene3D - 67 265 IPR015915 GO:0005515
Gma12g00849 1034 SUPERFAMILY Metallo-dependent phosphatases 656 961 IPR029052 -
Gma12g00849 1034 Gene3D - 634 974 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00849 Gma-Chr12 8123788 8137007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00849 662 897 Calmodulin-binding Proteins AT5G63870 29.044 2.43e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00849 - - gmx:100788485 1857.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00849 12 8123788 8137007 Gma12g00849 12 8123788 8137007 ECH
Gma11g01439 11 14898384 14912424 Gma12g00849 12 8123788 8137007 ECH
Gma12g00849 12 8123788 8137007 Gma11g01439 11 14898384 14912424 GST
Gma13g02766 13 42235122 42246731 Gma12g00849 12 8123788 8137007 PCT
Gma12g01791 12 38516183 38527474 Gma12g00849 12 8123788 8137007 PCT
Gma12g00849 12 8123788 8137007 Gma13g02766 13 42235122 42246731 PCT
Gma12g00849 12 8123788 8137007 Gma12g01791 12 38516183 38527474 PCT