Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00842 ATGGGGTTTTCGCTCAAAGAGGCTTTGAGGACTCTGTGCTCAAGGAATCGCTGGTCTTATGCCGTGTTCTGGAAGATCGGTTGTAATAATTCCAAGTTGTTAATCTGGGAAGATTACTACTACGAACCCTTGCCCTCTCCTTTCCCTCCACGAACTGTTGGGAGGTCTAATTTTCCTTACCAAGATGGGGAAGGATGTTGGTTTTCTTCTGAGTCTCAGCTAGGGATTCAGGAGGAGGACAGAGTCCGTGTATTGATCAACAAAATGATGGTGAATAATTCAGTCAGTATTGCTGGAGAAGGGATAGTTGGACGGGCAGCATTTACAGGAAACTATCAGTGGATTCTTTTGAACAATTTCACTAGAGATGCTTATCCACCAGAGGTATATCCTGAGTTGCATTACCAATTTTCAGCTGGAATGCAGACGGTGGCAGTTATTCCTGTGCTTCCCCATGGGGTTGTTCAACTAGGTTCTTTCTCGCCGATAATGGAAGATATAGGATTTGTGAATGATGTAAAGAACTTTATCTTGCAATTGGGATGTGTACCTGGTGCCCTTCTATCTGAAGACTATTCAGCAAAAGTTTCTAATGAAAAATTCGCTGGACCTGTGACCGTTGATCCACCTGTCATTACTTCAAACTGCACTCCCTCGGTAGCTAATGGTTCCAACCAACTTACTAATTCTCCTCTTGCTTCAAGGCCTGTTGCTCAGCCACCTCATCCTCTAAGGGGAGGAATAAATAATTACCAGGGTTCTTTATTGACACCTCAAGCCTATAACCCGAACCAGGTATTTGATGGCATTTGCCAACCAAAGGCTCATTCAATGATCAAAACAAATGTCTGTGGCCAACCAAAGAAGACCATTGTTGAGGCTGAAGCTAAGGTGATACCTACAAATTTTGATTCATGTCTGCAACAACATTCTGTTTATAATGCTAGATCTGCATTCAATGAGTTATCTAGTTTCAATCAATCAAATCTGAGTGACGGCAGCCTTAAATATATGGAACAACAAACATCAGGTGTTGGGAGACAGAGTCAAGTTATTCCTAACGTGAATCCATCAAGTGCCTTAAATATGCCTCGGCTGAAAATCGATGGAGGTAAAATTCTTGAACAGAATCAGAGTTCTAGTGACAGTTCACTACTCGGAGGAATCCCAATATGTAGTGGGAGTAATCTTTTGAGGACAAATATGATTAACTGCTCACTTTCAAATCCTCCCAAAGTATCCACTAACACTTCTGATTTTTCTGGAATGTACAAGGTTGGGTTTGGACTCCAAAGTAACAATACAACAACTAATGCTGTGCTTTGTTCTGTGCCTAATTTCACTAATCAATCAGTTAGCAATCACATGAATCTAGAAGGCTCTGGTCAGAAAAGTCTTTCCATTGATTTAAAGCAAGTGTGGGATGCCTTTGCGTCAACTGATCAAAGGATAGATGATGATTTGCTTCAGGCCGCCCTTAAGATTCCATCTCTTCATCTGGAGGAGCATGTGCCTATGGGTGATCACATCTCTGGTTTTGTTCAAGATTGCCTCAGTAAAGATCTTACTAGTCAACATATGATGAAAATGAATGTTAAGCATGCAGAAGCCGATGCTCAACTTCCATCAGGTGATGACCTCTTCGATGTTTTGGGCGTGGATTTGAAAAGGAGACTACTCAATGGAAACCGGAATGAGTTGCTTGCCACTGATTCAGATGCCATCACAGAACATCTAGATAAAAAGGCAACACACATGAATTTGCAAGGTGTAGGTCCTAATAATAGTTATTCAGTTAATGAAGCTATATCAGAAAGTGGCATCTTCTCTGGAACGGACACAGACCACCTTTTAGATGCTGTGGTTTTAAAAGCTCAATCTGCTGCAAAACAGAATTCTGATGAAATGTCATGCAGGACAACATTGACAAGGATTAGTACCGCCTCAATTCCTTCTCCTGTCTGCAAGCAAGTTATGCCTGATCATGTTGCCCCGAGGGGATTGTTTGATTTTCCTAAGACCGGAGTTAAAACAGCTTCTGCAGAAACAAGTTCTCTTAGGTCTGGGTGTAGCAAGGATGATGCTGGAAACTGCTCTCAAACTACTTCCATATATGGGTCTAAGCTTAGTTCATGGGTTGAGAATAGTAGTAATTTTAAACGTGAAAGCAGTGTTTCAACTGGATACTCCAAGCGACCAGATGAAGTTTGCAAATCAAATCGTAAAAGACTTAAACCAGGAGAGAACCCTAGGCCTAGGCCTAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAGTTGCGGGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATGCACTTCTGGAAAAGACCATCAAGCATATGCTTTTCCTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACAGACAGGGGAATCTAAGATTGTCAGTAAAGAAGGTGGATTGCTATTAAAAGATAACTTTGAGGGAGGGGCTACATGGGCATATGAGGTTGGTGCACAATCAATGGTTTGTCCAATCATTGTTGAGGATCTCAATCCTCCTCGTCAGATGCTAGTAGAGATGCTTTGTGAGGAATGCGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAGGATTAGGTTTAACCATCTTGAAGGGAGTCATGGAAGCTCGCAATGACAAGATCTGGGCACGCTTTGCTGTTGAGGCAAACAGGGATGTAACCAGGATGGAAATATTTATGTCACTGGTTCGTCTTTTGGATCAAACGATGAAGGGTGGTGCATCTTCGTCGAATGCAATTGATAACAACATGATGCTGTATCATTCTTTCCCACAAGCTACCCAGATACCAGCAACTGGCAGGCCTAGTAGTTTGCAATGA 2874 0.42 MGFSLKEALRTLCSRNRWSYAVFWKIGCNNSKLLIWEDYYYEPLPSPFPPRTVGRSNFPYQDGEGCWFSSESQLGIQEEDRVRVLINKMMVNNSVSIAGEGIVGRAAFTGNYQWILLNNFTRDAYPPEVYPELHYQFSAGMQTVAVIPVLPHGVVQLGSFSPIMEDIGFVNDVKNFILQLGCVPGALLSEDYSAKVSNEKFAGPVTVDPPVITSNCTPSVANGSNQLTNSPLASRPVAQPPHPLRGGINNYQGSLLTPQAYNPNQVFDGICQPKAHSMIKTNVCGQPKKTIVEAEAKVIPTNFDSCLQQHSVYNARSAFNELSSFNQSNLSDGSLKYMEQQTSGVGRQSQVIPNVNPSSALNMPRLKIDGGKILEQNQSSSDSSLLGGIPICSGSNLLRTNMINCSLSNPPKVSTNTSDFSGMYKVGFGLQSNNTTTNAVLCSVPNFTNQSVSNHMNLEGSGQKSLSIDLKQVWDAFASTDQRIDDDLLQAALKIPSLHLEEHVPMGDHISGFVQDCLSKDLTSQHMMKMNVKHAEADAQLPSGDDLFDVLGVDLKRRLLNGNRNELLATDSDAITEHLDKKATHMNLQGVGPNNSYSVNEAISESGIFSGTDTDHLLDAVVLKAQSAAKQNSDEMSCRTTLTRISTASIPSPVCKQVMPDHVAPRGLFDFPKTGVKTASAETSSLRSGCSKDDAGNCSQTTSIYGSKLSSWVENSSNFKRESSVSTGYSKRPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGAQSMVCPIIVEDLNPPRQMLVEMLCEECGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLDQTMKGGASSSNAIDNNMMLYHSFPQATQIPATGRPSSLQ 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00842 957 MobiDBLite consensus disorder prediction 722 758 - -
Gma12g00842 957 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 175 IPR025610 -
Gma12g00842 957 MobiDBLite consensus disorder prediction 219 235 - -
Gma12g00842 957 CDD bHLH_AtLHW_like 748 817 - -
Gma12g00842 957 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 744 793 IPR011598 GO:0046983
Gma12g00842 957 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 957 IPR043561 GO:0003700|GO:0006355
Gma12g00842 957 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 957 - -
Gma12g00842 957 MobiDBLite consensus disorder prediction 734 758 - -
Gma12g00842 957 MobiDBLite consensus disorder prediction 219 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00842 Gma-Chr12 7927738 7935707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00842 545 932 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 54.315 2.07e-116 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00842 - - gmx:100786351 1913.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00842 12 7927738 7935707 Gma12g00842 12 7927738 7935707 ECH
Gma12g00842 12 7927738 7935707 Gma11g01456 11 15239252 15245419 GST
Gma13g02775 13 42338522 42345630 Gma12g00842 12 7927738 7935707 PCT
Gma12g01783 12 38407007 38413891 Gma12g00842 12 7927738 7935707 PCT
Gma12g00842 12 7927738 7935707 Gma13g02775 13 42338522 42345630 PCT
Gma12g00842 12 7927738 7935707 Gma12g01783 12 38407007 38413891 PCT