Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00830 ATGTCTTCCAATAAGAAAAGTCTTCTCAGAACCGTGTTCACAGCAAACGGAAGCTGTGGTTGCAGCAAAACAAAATCCTCTAAAGTGCACGAGCCAACACCAAAGTCGAAAACAACACACATTCACCAAAAGGAAAACAACAACCTTAGTAGCATGGCTTCTTCCACCACTTCCCCGGAGCAAGTTGATGAAGAAGAGTTCACTTCCACCACAATCTCCGAATCCGAGACATTTCACGATCacaacaacaacaacaacaacaacgacaacaacaacaaTATTGTACTCAAACGAAGCCCCCTGGTGAATAGCGTGGCGATTGAGAAGGACTCTTCGAATCCGTATCATGATTTCAGGCACTCCATGCTCCAAATGATCTTTGAGAAGGAGATCGAGTCAGAGAACGACCTTCAAGACCTTCTGCAATGCTTTCTTCAGCTGAATGCGCAGTGTCATCACCACGTGATCGTTAAGGCCTTCAAGGAGATTTGCAAAGAAGCGTTTCCTCACAAGGTTATTACCACTTCTGTCGTGTCTGAACCATCTCCCTCTCACAAGAGCCCCCTCATTGTTCCAAAGAACCAATGA 588 0.4286 MSSNKKSLLRTVFTANGSCGCSKTKSSKVHEPTPKSKTTHIHQKENNNLSSMASSTTSPEQVDEEEFTSTTISESETFHDHNNNNNNNDNNNNIVLKRSPLVNSVAIEKDSSNPYHDFRHSMLQMIFEKEIESENDLQDLLQCFLQLNAQCHHHVIVKAFKEICKEAFPHKVITTSVVSEPSPSHKSPLIVPKNQ 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00830 195 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 174 IPR038933 GO:0045892
Gma12g00830 195 Pfam Transcriptional repressor, ovate 111 166 IPR006458 -
Gma12g00830 195 ProSiteProfiles OVATE domain profile. 107 166 IPR006458 -
Gma12g00830 195 MobiDBLite consensus disorder prediction 20 92 - -
Gma12g00830 195 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 174 - -
Gma12g00830 195 MobiDBLite consensus disorder prediction 43 92 - -
Gma12g00830 195 MobiDBLite consensus disorder prediction 28 42 - -
Gma12g00830 195 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Gma12g00830 195 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 105 164 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00830 Gma-Chr12 7763394 7764248 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma12g00830 Ovate 1.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00830 - - gmx:102667780 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00830 12 7763394 7764248 Gma12g00830 12 7763394 7764248 ECH
Gma12g00830 12 7763394 7764248 Gma11g01467 11 15413949 15414567 GST
Gma13g02785 13 42426001 42427260 Gma12g00830 12 7763394 7764248 PCT
Gma12g01770 12 38290084 38290620 Gma12g00830 12 7763394 7764248 PCT
Gma12g00830 12 7763394 7764248 Gma13g02785 13 42426001 42427260 PCT
Gma12g00830 12 7763394 7764248 Gma12g01770 12 38290084 38290620 PCT