Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00791 ATGGCGAGCCAAAGAATTGGAGAAACGGGTTTGTCTGAGTCGGGACCTTCAAGTCACCATGTTCCTTATGGAGTTCTTCATGGGATTAGTACTTCATCAGGCCTAATCAATCAAGGGTCTGCTTTTGATTTTGGGGAGTTGGAAGAGGCAATTGTTCTGCAAGGAATTAAGATAAGAAATGATGAAGCCAAAGCATCAGCTTTATTCACAGGCAGGCCTTCGGCCACACTGGAAATGTTCCCCTCATGGCCAATGAGATTCCAGCAAACCTCAAGAGGAGGTTCAAAGTCAGGAGGGGAAAGCACTGATTCAGGATCAGGAGTGAACACTCTTTCAACCAAAAATGAGCTAAGATTTGAAACAGAATCTCCAATAAGCATAAAAGCATCTCCTTCAGATCATCATCAGGCTTTTGATCAGCACCTTCAACAGCAGCAGCAACAACAACAACAACAACAGGAGACAGCAACAGCAGGCACATCATCACAGAATCAATCAGCAGCCAAATCACCTCAAGAAAAGAGGAAAGGAGCTGGTTCCACATCAGAGAAGCCACTTGATGCAAAGACACTGAGACGTTTAGCTCAAAACAGAGAAGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAACTAGAGTCAAGTAGATTAAAGCTCACCCACCTTGAACAAGACCTTCAAAGAGCTCGCTCTCAGGGTGTGTTTATGGGATGTGGTGGTGCTGGTGGCAGTTTAAGTTCTGGAGCTGCAATGTTTGACATGGAGTATGCAAGATGGTTGGAGGATGATCAGCGGCACATGATGGAGCTCCGTTCGGGGCTGCAGGTGCCGCTGCCGGACGGCGAACTAAGAGTGATTGTGGATGGATATCTGTCTCATTATGATGAGGTTTTCAGGCTGAAAGGGGTGGCTGTTAAAACAGATGTGTTTCATCTTATTAATGGCATGTGGACTTCACCAGCTGAGAGATGCTTCCTCTGGATAGGTGGTTTTAAACCATCAGAGCTCATCACAATGTTGATACCACAGTTGGAGCCCCTAGTGGAGCAGCAAATTATGGGCATACATGGACTCCGGCATTCGTTAGTACAAGCAGAAGAAGCTCTCACTCAAGGTCTTGAACAGCTTCAGCAGTCTCTTGTTGACACCATCGCCGGCAGTCCCGTCGCCGACGGTGTTCAACAGATGGTGGCAGCCATGGGTAAGCTTGGCAACCTTGAAGGATTTGTTAGTCAGGCTGATAATTTGAGGCAAATAACCCTTCACCAATTATGTCGATTGCTGACAGTCCGTCAAGCAGCACGGTGTTTTCTTGTGATTGGAGAGTATTATGGCCGTCTTAGAGCCCTTAGTTCTCTTTGGGCATCAAGACCACGAGAGACATTGATAAGTGATGATAACTCATGCCAAACAACCACGGAATTGCAAATGGTTCAATCTTCTCAAAATCATTTCTCAAGTTTCTGA 1476 0.4614 MASQRIGETGLSESGPSSHHVPYGVLHGISTSSGLINQGSAFDFGELEEAIVLQGIKIRNDEAKASALFTGRPSATLEMFPSWPMRFQQTSRGGSKSGGESTDSGSGVNTLSTKNELRFETESPISIKASPSDHHQAFDQHLQQQQQQQQQQQETATAGTSSQNQSAAKSPQEKRKGAGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTHLEQDLQRARSQGVFMGCGGAGGSLSSGAAMFDMEYARWLEDDQRHMMELRSGLQVPLPDGELRVIVDGYLSHYDEVFRLKGVAVKTDVFHLINGMWTSPAERCFLWIGGFKPSELITMLIPQLEPLVEQQIMGIHGLRHSLVQAEEALTQGLEQLQQSLVDTIAGSPVADGVQQMVAAMGKLGNLEGFVSQADNLRQITLHQLCRLLTVRQAARCFLVIGEYYGRLRALSSLWASRPRETLISDDNSCQTTTELQMVQSSQNHFSSF 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00791 491 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 192 207 IPR004827 GO:0003700|GO:0006355
Gma12g00791 491 PANTHER TRANSCRIPTION FACTOR TGA9 64 470 - -
Gma12g00791 491 Coils Coil 215 235 - -
Gma12g00791 491 MobiDBLite consensus disorder prediction 83 114 - -
Gma12g00791 491 Pfam bZIP transcription factor 188 230 IPR004827 GO:0003700|GO:0006355
Gma12g00791 491 SMART brlzneu 185 261 IPR004827 GO:0003700|GO:0006355
Gma12g00791 491 Gene3D - 188 236 - -
Gma12g00791 491 MobiDBLite consensus disorder prediction 176 191 - -
Gma12g00791 491 CDD bZIP_HBP1b-like 189 239 - -
Gma12g00791 491 MobiDBLite consensus disorder prediction 136 171 - -
Gma12g00791 491 ProSiteProfiles DOG1 domain profile. 252 460 IPR025422 GO:0006351|GO:0043565
Gma12g00791 491 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 187 231 IPR004827 GO:0003700|GO:0006355
Gma12g00791 491 MobiDBLite consensus disorder prediction 81 114 - -
Gma12g00791 491 Pfam Seed dormancy control 269 344 IPR025422 GO:0006351|GO:0043565
Gma12g00791 491 MobiDBLite consensus disorder prediction 127 191 - -
Gma12g00791 491 PANTHER TRANSCRIPTION FACTOR TGA9 64 470 - -
Gma12g00791 491 SUPERFAMILY Leucine zipper domain 189 231 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00791 Gma-Chr12 7372985 7381014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00791 141 491 bZIP Transcription Factor Family AT1G08320 68.644 3.86e-179 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma12g00791 DOG1 1.6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00791 K14431 - gmx:100101904 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00791 12 7372985 7381014 Gma12g00791 12 7372985 7381014 ECH
Gma13g02809 13 42637257 42644974 Gma12g00791 12 7372985 7381014 PCT
Gma12g01742 12 38020356 38028641 Gma12g00791 12 7372985 7381014 PCT
Gma12g00791 12 7372985 7381014 Gma13g02809 13 42637257 42644974 PCT
Gma12g00791 12 7372985 7381014 Gma12g01742 12 38020356 38028641 PCT