Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00789 ATGTTTTACCAGGGCACTCAACTCCCCCCTCCAAACAACAGTGATTCATCAGATGATGGTGTTCCAGTTTCACCACCAAGAGTCAGACTCAGAGATGGGAGGTACTTGGCTTATAGAGAAAAGGGTGTCCCCAAGGACCAAGCAAAACACAGCATCATCATTGTACATGGCTTTGGAAGCTCCAAAGATATGAATTTTCTGGCACCCCAAGAACTAATAGATGAATTGGGTATATATATTCTGCAATATGATCGAGCTGGGTATGGAGAGAGTGATCCAAACCCCAAACGCTCACTGAAAAGTGAAGCACTTGACATTGAAGAGCTTGCTGATCTGTTACAGATAGGGTCAAAATTTTATTTGATTGGTGTCTCAATGGGATCATATGCTACATGGAGTTGTTTGAACTACATCCCCAACAGGCTAGCAGGTGTGGCTATGATAGCTCCAGTGATAAATTATCTATGGCCTTCCTTCCCTGAGAGTCTGATAAAAGAGGACTATAGGAGGAAACTTATCAAGTGGTCCATGTGGTTTGCAAACTATTTTCCTAGATTGTTGTACTGGTGGGTGACTCAAAAGTGGCTCCCTTCAAATTCTGTCATAGAAAAAAACCCAGCTTTCTTCAACAAAAGAGATATAGATATTTTAGAGACAATTCCTGGCTTCCCAATGCTTACCAAGaacaaattaagggaacaagttgtttttgacactctaaggggtgactggatggtggcctttggcaactgggaatttgaccctctgaagctaagtaatccattccctgataatagaagttcagctcacatttggcagggctatgaagataaggtagtgccctctcaaatccaaaggtttgttacacagaagctgccttggatacaatatcatgaagttccagatggtggccatttgattgtgcactatagtggcttatgtgaGGCCATTCTGAAGGCACTTTTACTTGGAGAGGAAAATCTTTCATATAGACCTAGACCAGAAGTATTTGTATCTTGA 1020 0.3098 MFYQGTQLPPPNNSDSSDDGVPVSPPRVRLRDGRYLAYREKGVPKDQAKHSIIIVHGFGSSKDMNFLAPQELIDELGIYILQYDRAGYGESDPNPKRSLKSEALDIEELADLLQIGSKFYLIGVSMGSYATWSCLNYIPNRLAGVAMIAPVINYLWPSFPESLIKEDYRRKLIKWSMWFANYFPRLLYWWVTQKWLPSNSVIEKNPAFFNKRDIDILETIPGFPMLTKNKLREQVVFDTLRGDWMVAFGNWEFDPLKLSNPFPDNRSSAHIWQGYEDKVVPSQIQRFVTQKLPWIQYHEVPDGGHLIVHYSGLCEAILKALLLGEENLSYRPRPEVFVS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00789 339 Gene3D alpha/beta hydrolase 17 322 IPR029058 -
Gma12g00789 339 MobiDBLite consensus disorder prediction 1 20 - -
Gma12g00789 339 Pfam Alpha/beta hydrolase family 52 307 IPR000073 -
Gma12g00789 339 MobiDBLite consensus disorder prediction 1 27 - -
Gma12g00789 339 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 3 332 - -
Gma12g00789 339 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 332 - -
Gma12g00789 339 SUPERFAMILY alpha/beta-Hydrolases 20 308 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00789 Gma-Chr12 7352711 7355016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00789 46 308 Acyl Lipid Metabolism Gene Families AT1G64670 22.662 3.31e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00789 - - gmx:100803294 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00789 12 7352711 7355016 Gma12g00789 12 7352711 7355016 ECH
Gma03g01790 03 44015499 44021024 Gma12g00789 12 7352711 7355016 ECH
Gma10g00659 10 7336363 7341618 Gma12g00789 12 7352711 7355016 ECH
Gma13g01343 13 28084795 28091153 Gma12g00789 12 7352711 7355016 ECH
Gma12g00789 12 7352711 7355016 Gma11g01513 11 15999602 16000556 GST