Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00771 ATGAGCGTCATTAATTTACGATTTTGCCACTGTTCCCAACTCCTCCTCCTCTCACCAAACCCGAAGCTCTCTTCTTCCTCGCAAACTGCAAAGTTAACTCTGAGAAAGAAAAACCCAACGACCCCTTTTGCCATTTCCTGCAAAACCCGTTTCTCTTCTTCAATTCGCGCGTCCATGGCTTCACCCTCCATCACAGACGCCGAAACAAAGCCGTTTTCTGTTCTCTTCGTGTGCCTCGGCAACATCTGCAGAAGCCCCGCTGCTGAAGGAGTCTTCACTGACTTAGTCAACAAAAGGGACCTCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAGGGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATTCAGATAACTTCTATTTCGAGGCCAATCAAGCCCTCTGATTTCGTTGACTTTGACCTCATTCTTGCTATGGACAAACAGAACAGAGAGGACATATTTGAGGCCTTTAATAGATGGAAAGATAGACATTCTTTACCGGATGGTGCACATAAAAAGGTTAAGTTGATGTGCTCGTACTGTAAGAAGCATGATGAAAGTGAAGTTCCGGATCCTTATTATGGTGGACCGCAAGGGTTTGAGAAGGTGTTGGATTTGCTTGAAGATGCTTGCGGATCATTACTGGAAACCATTTTGGCAGAAAACAAACATGTACAACAATCCTGA 723 0.4509 MSVINLRFCHCSQLLLLSPNPKLSSSSQTAKLTLRKKNPTTPFAISCKTRFSSSIRASMASPSITDAETKPFSVLFVCLGNICRSPAAEGVFTDLVNKRDLNSKFKIDSAGTINYHEGNEADSRMRAASKRRGIQITSISRPIKPSDFVDFDLILAMDKQNREDIFEAFNRWKDRHSLPDGAHKKVKLMCSYCKKHDESEVPDPYYGGPQGFEKVLDLLEDACGSLLETILAENKHVQQS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00771 240 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 5 235 - -
Gma12g00771 240 Gene3D - 56 235 - -
Gma12g00771 240 PRINTS LMW phosphotyrosine protein phosphatase signature 74 91 IPR017867 GO:0004725|GO:0006470
Gma12g00771 240 PRINTS LMW phosphotyrosine protein phosphatase signature 117 133 IPR017867 GO:0004725|GO:0006470
Gma12g00771 240 PRINTS LMW phosphotyrosine protein phosphatase signature 201 216 IPR017867 GO:0004725|GO:0006470
Gma12g00771 240 Pfam Low molecular weight phosphotyrosine protein phosphatase 74 227 IPR023485 -
Gma12g00771 240 SMART LMWPc_2 72 229 IPR023485 -
Gma12g00771 240 SUPERFAMILY Phosphotyrosine protein phosphatases I 70 230 IPR036196 -
Gma12g00771 240 CDD LMWPTP 73 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00771 Gma-Chr12 7114884 7118591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00771 37 234 Protein tyrosine phosphatase (PTP) family AT3G44620 61.947 6.47e-91 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00771 K25307 - gmx:100797254 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00771 12 7114884 7118591 Gma12g00771 12 7114884 7118591 ECH