Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00755 ATGGATGCACCAATGGAGTTTTGGGGTGTTGAGGTTAAGGTTGGGCAGACTGTGACGGTTGACCCAATGGATCCTGTGGATTCATACATACACATTTCTCAGGTTGCGCTCGGAGAGGCGAAAAAGGACAAACCTAATGAACCTGTGGTTCTGTACTTGAAAGTTGGTGAACAGAAGATTGTTTTGGGAACCCTTTCTAGGGATGGCATCCCTCACCTATCATTGGATTTGGTTCTGGACTCCGATTCTGAGCTTTCCCACACTTCAAAAAGTGCCAGTGTCTTTTTCTGTGGATACAAAGTTCTAACTGGCAATGACAATGCTTCTGACTTTTCTGATAGTAGTGAAGAGGACGAGGAACTTGCATTGGAGGGACAAGATAATGGAAAACCTGAATTAAAAGCTGAAGGTGCGAAGGTTACCAAACCTTCTAAATCTATTCCCAAGATTGGTGCACCAGCAAAAGCTGCTGATCCTAAGAAAGACGAggatgatgattccgatgatgaatcggatgatgatCTTGCTGGTGAAGATGAATCTGGAAGTTCCGATGAGATGGATGATGATAGCAATAGTGAAGAGGAGAGTGATGGAGATGATGAAGAGACCCCTGCTAAGAAGGTGGATCAGGGCAAGAAGAGACCCAATGAATCTGCAGCAAAAACTCCTATTTCTGCCAAGAAAGCTAAAACTGCTACTCCTGAAAAGACTGATGGTAAGAAAAGTGTACATGTAGCTACTCCTCATCCTTCGAAAAAGGGTGGGAAAACTCCCAACAGTACAAAAGGCCAGACTCCCAATTCTGCTGGACAACTATCTTGTGCAAGTTGTAAAAAGTCTTTCACCAACGAAGCTGGTCTGCAACAACATAAGAAGGCTAAGCATGGTGGTCAGTGA 900 0.4256 MDAPMEFWGVEVKVGQTVTVDPMDPVDSYIHISQVALGEAKKDKPNEPVVLYLKVGEQKIVLGTLSRDGIPHLSLDLVLDSDSELSHTSKSASVFFCGYKVLTGNDNASDFSDSSEEDEELALEGQDNGKPELKAEGAKVTKPSKSIPKIGAPAKAADPKKDEDDDSDDESDDDLAGEDESGSSDEMDDDSNSEEESDGDDEETPAKKVDQGKKRPNESAAKTPISAKKAKTATPEKTDGKKSVHVATPHPSKKGGKTPNSTKGQTPNSAGQLSCASCKKSFTNEAGLQQHKKAKHGGQ 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00755 299 ProSitePatterns Zinc finger C2H2 type domain signature. 275 296 IPR013087 -
Gma12g00755 299 MobiDBLite consensus disorder prediction 124 139 - -
Gma12g00755 299 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 5 295 - -
Gma12g00755 299 MobiDBLite consensus disorder prediction 232 246 - -
Gma12g00755 299 Pfam Nucleoplasmin-like domain 7 100 IPR041232 -
Gma12g00755 299 Gene3D Nucleoplasmin core domain 2 105 - -
Gma12g00755 299 MobiDBLite consensus disorder prediction 202 217 - -
Gma12g00755 299 MobiDBLite consensus disorder prediction 109 275 - -
Gma12g00755 299 MobiDBLite consensus disorder prediction 254 275 - -
Gma12g00755 299 MobiDBLite consensus disorder prediction 163 201 - -
Gma12g00755 299 ProSiteProfiles Zinc finger C2H2 type domain profile. 273 299 IPR013087 -
Gma12g00755 299 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 5 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00755 Gma-Chr12 6937979 6941872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00755 5 296 C2H2 Transcription Factor Family AT5G03740 40.256 3.02e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma12g00755 NPL 1.4e-11 CL0055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00755 - - gmx:547649 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00755 12 6937979 6941872 Gma12g00755 12 6937979 6941872 ECH
Gma12g00755 12 6937979 6941872 Gma11g01551 11 16555544 16558180 GST
Gma13g02839 13 42902255 42905597 Gma12g00755 12 6937979 6941872 PCT
Gma12g01711 12 37640956 37644722 Gma12g00755 12 6937979 6941872 PCT
Gma12g00755 12 6937979 6941872 Gma13g02839 13 42902255 42905597 PCT
Gma12g00755 12 6937979 6941872 Gma12g01711 12 37640956 37644722 PCT