Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00745 ATGGAGAGAAGTGTTGATTACAGTTCAGAGGAGGAATGCACGGAGGATTATCGGCGTGGAGGATACCACGCGGTTCGAGTCGGCGACGCTTTCAACAATGGCCGTTACATCGTGCAGTCCAAACTCGGTTGGGGCCATTTTTCCACCGTCTGGCTCGCTTGGGACACTCTCAATTCGCATTATGTAGCCCTTAAAATTCAGAAGAGTGCACAGCACTATACTGAAGCCGCGATGGATGAAATAAAGATTCTCAAACAAATAGCTGAGGGGGACCCGGATGATAAGAAATGTGTTGTGAAGCTTTTGGATCATTTTAAGCATTCGGGGCCTAATGGCCAGCATGTGTGTATGGTTTTTGAATTCCTGGGTGATAATCTTCTCACCCTTATCAAATATAGTGGCTATCGTGGGCTTCCTCTCCCCATGGTTAAAGAAATCTGTTTTCATATTTTGGTGGGCTTGGATTACTTGCATCGCGAGCTTTCTGTCATTCACACTGATTTGAAGCCAGAGAATGTGTTGCTTCTGTCACTGATAAATCCATCTAAAGATCCTAGGAAATCAGGTGCTCCACTCATCCTTCCAAACACCAAGGATAAGGCTGTGTCCAATAATGGGACTAACCAAGACAATAAAATTTTGAATGGAGATCTGATGAAGAACCAGAAAAAGAAAATGCAGAGGAAGGCTAAGGTAGCTCAAGGCTGTGTTGAGAAGGAAAATTCAGAGGAAGCTGAGGATTATAAAGGACTCGAGCAAGAAGATAGTGGCAATGATGTGAAATTAAGTGTGGAATCAGTTGAAGATAAACATAATAGTTCTCTGAGTAAAGATGAATCGAGTTCAACTAAGATTTTTGAGAAGGATGTTTCACAAGGAAGTCATGGTCACAGGAGAGGCAGCCGTTCCATGAGAAAGAAGTTGCTGGAAGCTGTTGATCTTAAGTGCAAGCTGGTTGATTTTGGTAGTGCTTGTTGGACTTACAAACAATTCACAAATGATATTCAGACAAGGCAATATAGGTGTCCTGAGGTTCTTCTTGGATCCAAATATTCAACCCCTGCAGATTTATGGTCCTTTGCTTGCATTTGCTTCGAGCTTGCCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGAGATGAGGATCATCTGGCATTGATGATGGAGCTTCTTGGGAAGATGCCTCCCAAGATTGCACTAGGTGGTCGCTATTCCCGAGAATTTCTCAATAGACATGGTGACTTGAGGCACATCAGCAATTTGCGATTTTGGCCAATGGATAAGGTGCTGATGGACAAGTATAATTTCAATGAGCAAGACACAAATGACTTGGTTGACTTCCTTGTTCCAATACTTGATTTTGTCCCGGAAAAGAGACCAACAGCTGCTCAGTGCCTTAGTCATCCATGGATGAGTGCAGGTCCTCGGACTCTTGAGTCCTCAATAACTACCGTGCAACCTGATGCCATCAACGAGGAATTGTCTAAAAGGAGGAAGAGGGAAACGGCTGAGAAGGAGGCAGTGGAAATTGGTTTGAGGAATATATCCATTAAAGAAACATCTGAGCCTCTCAAAGACTCCCAACCTCTAAAGTCATTCAAATAG 1620 0.434 MERSVDYSSEEECTEDYRRGGYHAVRVGDAFNNGRYIVQSKLGWGHFSTVWLAWDTLNSHYVALKIQKSAQHYTEAAMDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSGYRGLPLPMVKEICFHILVGLDYLHRELSVIHTDLKPENVLLLSLINPSKDPRKSGAPLILPNTKDKAVSNNGTNQDNKILNGDLMKNQKKKMQRKAKVAQGCVEKENSEEAEDYKGLEQEDSGNDVKLSVESVEDKHNSSLSKDESSSTKIFEKDVSQGSHGHRRGSRSMRKKLLEAVDLKCKLVDFGSACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGKMPPKIALGGRYSREFLNRHGDLRHISNLRFWPMDKVLMDKYNFNEQDTNDLVDFLVPILDFVPEKRPTAAQCLSHPWMSAGPRTLESSITTVQPDAINEELSKRRKRETAEKEAVEIGLRNISIKETSEPLKDSQPLKSFK 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00745 539 ProSitePatterns Protein kinases ATP-binding region signature. 42 65 IPR017441 GO:0005524
Gma12g00745 539 Gene3D Transferase(Phosphotransferase) domain 1 119 477 - -
Gma12g00745 539 Gene3D Phosphorylase Kinase; domain 1 12 118 - -
Gma12g00745 539 MobiDBLite consensus disorder prediction 198 216 - -
Gma12g00745 539 MobiDBLite consensus disorder prediction 231 296 - -
Gma12g00745 539 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 537 - -
Gma12g00745 539 CDD STKc_SRPK 25 476 - -
Gma12g00745 539 MobiDBLite consensus disorder prediction 185 302 - -
Gma12g00745 539 PANTHER SERINE KINASE-LIKE PROTEIN 5 537 - -
Gma12g00745 539 Pfam Protein kinase domain 37 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00745 539 Pfam Protein kinase domain 313 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00745 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Gma12g00745 539 ProSiteProfiles Protein kinase domain profile. 36 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00745 539 SMART serkin_6 36 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00745 539 SUPERFAMILY Protein kinase-like (PK-like) 31 484 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00745 Gma-Chr12 6780495 6784789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00745 6 522 EF-hand Containing Proteins AT5G22840 67.562 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Gma12g00745 Pkinase 1.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00745 K08832 - gmx:100790060 1068.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00745 12 6780495 6784789 Gma12g00745 12 6780495 6784789 ECH
Gma13g02853 13 43028151 43031786 Gma12g00745 12 6780495 6784789 PCT
Gma12g01698 12 37482335 37485966 Gma12g00745 12 6780495 6784789 PCT
Gma12g00745 12 6780495 6784789 Gma13g02853 13 43028151 43031786 PCT
Gma12g00745 12 6780495 6784789 Gma12g01698 12 37482335 37485966 PCT