Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00735 ATGGAATTCTGGAACCGCAGATTGCTACTACAGAACGAGGACGTTCCCCTCTCGATGCCACCTCTCTCTCACACTCACACCAAACACGCCACTAACGCATCATCATCCTCGCCGCCGCAATCTTCGGCTTTCCAATTCCAAAGCCCACTGCAGGTTTCGATTCCTCCAGTTTTTTCATCGAGTGTGGCCTACGTCTTCCTCATCCTCTTCACCACCTTCTTCTTCGTCGGCTTCGTCTTCCTCTACTTCCGCCAGTTCGCCTCCGACGCCGCCGCCGCCGGATCCTACCGCCGCCGCTGGGAGGAGGGCGCGGCAGCGGCGGCGGAGGCAAAGAAGTGCCTGCCGGTGGTGGCGCACTGCGGGGAGGGGTGCGCGGAGTGCGCGATATGCCTGGAGGAGCTGCGAGAGGGGGACGCGGTGAAGATGATTCCGTACTGCAAGCACGTGTTCCACCCGCACTGCATTGACACGTGGCTCGATAAGCATGTCACGTGCCCCGTGTGCCGGTGCAGTGAGCTGCTATGTGGAGAAGAGGTGGTGGGGTCGGTGTCAGCGAGAAGACAAGAAGAAGTGGTTCTAAATTTGGATTAG 591 0.5922 MEFWNRRLLLQNEDVPLSMPPLSHTHTKHATNASSSSPPQSSAFQFQSPLQVSIPPVFSSSVAYVFLILFTTFFFVGFVFLYFRQFASDAAAAGSYRRRWEEGAAAAAEAKKCLPVVAHCGEGCAECAICLEELREGDAVKMIPYCKHVFHPHCIDTWLDKHVTCPVCRCSELLCGEEVVGSVSARRQEEVVLNLD 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00735 196 PANTHER RING-H2 FINGER PROTEIN ATL57 32 186 - -
Gma12g00735 196 MobiDBLite consensus disorder prediction 24 40 - -
Gma12g00735 196 ProSiteProfiles Zinc finger RING-type profile. 127 169 IPR001841 -
Gma12g00735 196 Pfam Ring finger domain 126 169 IPR001841 -
Gma12g00735 196 SUPERFAMILY RING/U-box 126 171 - -
Gma12g00735 196 SMART ring_2 127 168 IPR001841 -
Gma12g00735 196 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 123 171 IPR013083 -
Gma12g00735 196 MobiDBLite consensus disorder prediction 19 40 - -
Gma12g00735 196 PANTHER RING FINGER DOMAIN-CONTAINING 32 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00735 Gma-Chr12 6640186 6641076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00735 58 171 Rapid Response to Elicitors AT3G05200 39.844 2.18e-24 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00735 - K10664 gmx:102668652 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00735 12 6640186 6641076 Gma11g01572 11 16886019 16886654 GST