Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00734 ATGGCTATTGCTGGTCTACACAGTGTGTCTGTGCTCGACTCTTCTTTCCTGAGGGACTCCCGTTCCCAGTCATCTGGGAGAGGTGGAGATGGAAGGCGGGGAACCACCCGGTCATCTTCGCTCTTGCAAATGTGGCGAGAGATTGAGGAAGAACATGTGGTGAATCAAGTTCAAGGAAGACCTGATGAAGTACCTATTGAACAAAGGAGGGATGGGTTGGTTGCGGACCCTTCACAAGACATCCAAGAAAGAAGGCAGCAGCATGTTTTAGAAGATGCAGTTTTGGGTGAGAATGAATCTGAAACATGGTCACAGTCGCAAAGTCAGAATGAATCCCATGATGGTAACGAGGATTTAAACAATTCTAGCTGTGATAACTCTTCTGACTTGGGAGAAGTTGAAAGGGAAAGAGTGAGGCAAATTTTCAGAGAATGGATGAATAGTGGCGCTAGGGATCATGCATCAAACATTTCTGGAAGAAATAACGGTTCAAGGGGAGAATGGCTTGGGGAAACCGAGCAGGAAAGGGTGAGAGTTATTAGGGAGTGGGTACAAATGAGTAGCCAGCAGAGAAGTGTTTCCTCTGGGGAAAACAGGGAAGAACCATCTGCTGAAATTGATATGCAAATTGAACGTGTGCGTGATGGACTCGTTGTTAACCAGATTGGGGGCCAAACTGAGCATACACGGAGGGGCATACGTAAATTATGTGGCCGACAAGCTATGCTTGATATGCTTAAGAAGGCTGAGAGAGAAAGGCAAAGAGAAATTCAGGAGTTGTTGAACCATCAGGCCGTGTCACAATTCCCCTATCGAAATCGCATTCAGGCATTGCTTAGAGGCAGATTCTTGAGAAATGATAGACCTGTTGATAATAACAAGCCCCTTTCTGTTGCAGAAAGTGAATTGGGCTTCTTGAGGCGAAGACAAACTGTATCAGGTCTAAGGGAAGGATTTTTCTGTAGAAAGGAGAACAGTGGTTGCAGTCAAGCAACCAGCAATGCAGATACCTCATCTAATGTTGAAATTGATTTTAATACAAATGAACAAATGGGATCAAGCAGTTCACATATAGTCCCAATTGTACATCCTGAACAGTCTGACCCTAATCACAGAGGAAGCAATAGACTTGGGGTATCAGGCAGCCAGAACTGCGTACGAGGTACCGCGTGTGAGAATTTGGATTGGCAAGAATCTACTGCTCAAGCAGATCAGTTGCAGCATTTGCCAATTGAATCACTAGATTGTCAATCATCATTCAGCGCTTGTGTTGAAAGAGGGGACAACCCTGAGCAAAATGTTGATGTGATGCCAACTGAAGATGCTGCTAATGAAATTACCCAACAAAGCTTGCGAATTGAAGATTCAGAGCATAGTAATAATCAAGAATTCAGTGAGGTGCATAATGAGCCGTCTGAGCTGGGTGGTATAAATAATAGTCAAAACAATTCTTCAAATTACAACATTCATATGGAGGATAATGTTGTTGATGATGTAAATTGGAATGAATCTGGTGCTCTAGAAGGAGAACAGCCAGAAGAAGTTTTTGAAAATGAAGGAAGTGAGTGGTATCAGAATAATACCGAATGGAGAAATAGCACTGAGGAAAATGTCGATGATAATCAGCTCAGCAATACAGCAAATGAGTGGCCTGACAACAGTTTGGCAAACGAGGATGGAGAAAACTCTCGTCTGCAAGAATCTCATGAAGTGTGGCAAGAAGATGGTGGCTTCCAAGAGGCTGTGGAAAATTGGTTGGGAGGACCTTCTGATCATGAAAGTGCTCCAGTTGGTAGAATTCGTGGATTTTATTTTCCTGAAGATGACAACGTGTACAGTGTTGAACTCAGGGAACTTCTTAATAGGAGAAGTGTCTCTAACCTCCTTCGCAGCAGTTTTCGTGAGAGTCTTGATCAGTTGATACAGTCATATGTTGAAAGGCAAGGTCATGCTAACATTGACTGGGAATTTCAAGAAACAACTCCTTCTTCTGCCTCAGTAGAGCAGGACCTTGAGCAGCATAGTAGGGATCAAATTGTTGGCCAGGAGGAGGTTACTGTTAGTCCACTTAACCTGCCCTCTTTACCTATACCACCTCCTCTGCCTATTTGGGACCAGCACCACCATCGTGACAACTGGTCACAGAATGACATAAATAATCAGCGTCTAGTAATCGATTGGGAGATTATTAATGACTTGAGAATTGACATGGCTCGATTACAGCAAAGGATGAATAACATGCAGAGAATGCTGGAGGCTTGTATGGATATGCAGCTTGAGTTGCAGCGATCTATAAGGCAAGAAGTTTCTGCAGCCCTAAATCGCTCTGCTGGTTCATCAGGAATACATGATTGCGAGTCACCAGAAGATAAATCTAAATGGGAATGTGTGAGAAAAGGACTTTGCTGTATATGCTGTGAAAGCAATATCGATTCTTTGTTGTACAGATGTGGTCATTTGTGTACATGTTCAAAATGTGCCAATGAGTTGCTTCAAAGCAGAAGGAATTGCCCAATGTGTCAAGCTCCTGTGGTGGAGGATTCTAACAAATTTTATCTCCCGGACGTTTCCAGAATCACGTCCTTGATTGGAGTTAAACAAAAATTGAATCAAGGCAACGAATTCAATGTTTTCAAGAATTGA 2643 0.4309 MAIAGLHSVSVLDSSFLRDSRSQSSGRGGDGRRGTTRSSSLLQMWREIEEEHVVNQVQGRPDEVPIEQRRDGLVADPSQDIQERRQQHVLEDAVLGENESETWSQSQSQNESHDGNEDLNNSSCDNSSDLGEVERERVRQIFREWMNSGARDHASNISGRNNGSRGEWLGETEQERVRVIREWVQMSSQQRSVSSGENREEPSAEIDMQIERVRDGLVVNQIGGQTEHTRRGIRKLCGRQAMLDMLKKAERERQREIQELLNHQAVSQFPYRNRIQALLRGRFLRNDRPVDNNKPLSVAESELGFLRRRQTVSGLREGFFCRKENSGCSQATSNADTSSNVEIDFNTNEQMGSSSSHIVPIVHPEQSDPNHRGSNRLGVSGSQNCVRGTACENLDWQESTAQADQLQHLPIESLDCQSSFSACVERGDNPEQNVDVMPTEDAANEITQQSLRIEDSEHSNNQEFSEVHNEPSELGGINNSQNNSSNYNIHMEDNVVDDVNWNESGALEGEQPEEVFENEGSEWYQNNTEWRNSTEENVDDNQLSNTANEWPDNSLANEDGENSRLQESHEVWQEDGGFQEAVENWLGGPSDHESAPVGRIRGFYFPEDDNVYSVELRELLNRRSVSNLLRSSFRESLDQLIQSYVERQGHANIDWEFQETTPSSASVEQDLEQHSRDQIVGQEEVTVSPLNLPSLPIPPPLPIWDQHHHRDNWSQNDINNQRLVIDWEIINDLRIDMARLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSAGSSGIHDCESPEDKSKWECVRKGLCCICCESNIDSLLYRCGHLCTCSKCANELLQSRRNCPMCQAPVVEDSNKFYLPDVSRITSLIGVKQKLNQGNEFNVFKN 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00734 880 MobiDBLite consensus disorder prediction 465 488 - -
Gma12g00734 880 PANTHER PROTEIN, PUTATIVE-RELATED 1 846 - -
Gma12g00734 880 MobiDBLite consensus disorder prediction 98 128 - -
Gma12g00734 880 MobiDBLite consensus disorder prediction 532 562 - -
Gma12g00734 880 Pfam Zinc finger, C3HC4 type (RING finger) 799 844 - -
Gma12g00734 880 Coils Coil 730 757 - -
Gma12g00734 880 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 786 862 IPR013083 -
Gma12g00734 880 Coils Coil 239 266 - -
Gma12g00734 880 MobiDBLite consensus disorder prediction 96 133 - -
Gma12g00734 880 CDD mRING-HC-C3HC5_NEU1 802 840 - -
Gma12g00734 880 SUPERFAMILY RING/U-box 801 847 - -
Gma12g00734 880 MobiDBLite consensus disorder prediction 17 38 - -
Gma12g00734 880 MobiDBLite consensus disorder prediction 532 561 - -
Gma12g00734 880 MobiDBLite consensus disorder prediction 455 488 - -
Gma12g00734 880 ProSiteProfiles Zinc finger RING-type profile. 802 841 IPR001841 -
Gma12g00734 880 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00734 Gma-Chr12 6625730 6631961 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00734 - - gmx:100804184 1587.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00734 12 6625730 6631961 Gma12g00734 12 6625730 6631961 ECH
Gma11g01573 11 16890714 16896478 Gma12g00734 12 6625730 6631961 ECH
Gma12g00734 12 6625730 6631961 Gma11g01573 11 16890714 16896478 GST
Gma13g02857 13 43083615 43089141 Gma12g00734 12 6625730 6631961 PCT
Gma12g01692 12 37365299 37370516 Gma12g00734 12 6625730 6631961 PCT
Gma12g00734 12 6625730 6631961 Gma13g02857 13 43083615 43089141 PCT
Gma12g00734 12 6625730 6631961 Gma12g01692 12 37365299 37370516 PCT