Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00723 ATGAGGTTTTTGACTGTAGGCATTGCCATAATGAAGCTAAGGTACTCATGTCCCGTTTGCTCAAAATCCGTCTGTGACATGTCAAGTGTGTGGAATAAGCTTGAGGAATTGATTGCCTCAACTCCAATGCCTGAAACCTACAAAAACAAGATGGTGTGGATACTTTGCAATGATTGTGGAGTAAACTCTCATGTACAATTCCAAATTATGGCCTTAATTGCAACTCATACAACACAAGACAGATACAGGGAGTACCTGCTACATCAAGCTCATCTTGGGTGA 282 0.4113 MRFLTVGIAIMKLRYSCPVCSKSVCDMSSVWNKLEELIASTPMPETYKNKMVWILCNDCGVNSHVQFQIMALIATHTTQDRYREYLLHQAHLG 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00723 93 Pfam Zinc-ribbon 25 71 IPR039512 -
Gma12g00723 93 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RZFP34 12 74 - -
Gma12g00723 93 Gene3D - 49 79 - -
Gma12g00723 93 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 12 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00723 Gma-Chr12 6496781 6498269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00723 15 67 C2H2 Transcription Factor Family AT3G18290 43.396 1.03e-10 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma12g00723 zinc_ribbon_6 2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00723 K10144 - gmx:100802067 152.14