Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00706 ATGGCAAGGCTTAATGTAAGAAGCAGCAGCAAAAGGAGGGTTTTAGATGGTGTTTTGAAGTTGAAGAGTGTGTTTGAAAAGCTTCAGAAGAGTCTTTTATTGCGCAGAAATAAATCAAGTTCTTCCTATTATGGAGATTATGACACAACAGCGTGTGTGCTAGAAGGACATTTTGCAGTGATTGCTGAGCATGAAAAGGAGACAATAAAGAGATTCTTGGTGCCATTGAGCTACTTAAGAAACTCAACATTCTTGGGTCTATTGGAACAAGCAGCAGAAGAGTATGGGTTTGATCAACATGGTGCACTAACGATTCCTTGCAGGCCTAGTGAACTTGAGAGGTTATTATTGGCTCAGCAACGGAAAGGAAGAGAGAGATTCTTCTGA 387 0.4057 MARLNVRSSSKRRVLDGVLKLKSVFEKLQKSLLLRRNKSSSSYYGDYDTTACVLEGHFAVIAEHEKETIKRFLVPLSYLRNSTFLGLLEQAAEEYGFDQHGALTIPCRPSELERLLLAQQRKGRERFF 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00706 128 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 25 122 IPR003676 GO:0009733
Gma12g00706 128 Pfam Auxin responsive protein 27 116 IPR003676 GO:0009733
Gma12g00706 128 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 25 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00706 Gma-Chr12 6278961 6279347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00706 45 107 Calmodulin-binding Proteins AT5G20810 47.887 4.42e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00706 - K14488 gmx:102667358 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00706 12 6278961 6279347 Gma12g00706 12 6278961 6279347 ECH
Gma12g00706 12 6278961 6279347 Gma11g01601 11 17248261 17248671 GST
Gma13g02876 13 43300642 43301076 Gma12g00706 12 6278961 6279347 PCT
Gma12g01670 12 37045384 37045794 Gma12g00706 12 6278961 6279347 PCT
Gma12g00706 12 6278961 6279347 Gma13g02876 13 43300642 43301076 PCT
Gma12g00706 12 6278961 6279347 Gma12g01670 12 37045384 37045794 PCT