Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00691 ATGAGCAGCTTAAGGCCCGAATTGCATGTTGCACAACAACTTCGGCGCGACAAATTGAGGATCCAAAACAGTTCCCAACAACACTTGCAAGAGTTCTCCAACAACAACCTTGAACACTTGTCGTTACACCCAGGGTTCAACTTGGATCTCCTTCAAGTAAGAAACGTTCGAAATGGCAACATGCTTGACGAAGCTGCAGCAGCACTTTATTCATCAGAAATGATCACTTTTTCGAACCCTTTATCTGCTCCTAGAAACCCTTTGGAGTGTCAAGAGCTTATGATGGCTCAGTATGGTTCAACTTCGTTTCCTCATTCATCATCCACAAAGGAGCAACAATGTGAACCACGCAACTTAGGTGCTAGTGGGATGGTGAATTATAACGGAAGCAACCCCAACAACAACAACAGCACCTTTTACTCTTCTGAACTCAATAACAATGTTTCTAGTGAAATGGGCAATAGCGAAATCCAAATTCAGAAGCAGTTTGGTGAAATACATTACCCTCCTTCGTCATCTTCTTCGCCACCACTTTACCATAATGCTTTGCAGGACATGGCTTATGGCGTTTGGGGAGGGAATAATAATAATCATGGTGAATCTGTGCTTCATTATGGAAACAACGAGTTACGCTTTGGTGGTGCTAGTTTATGGACACATAATAATAGTGCATTGGGTTTCAAGAAGATCAATAATGAACAGTTACATGACACGAATCATCCTCATCAGGGTCTATCATTGTCACTCTCATCAAACTCACAACAACAATCATCCAAGCCGTGTTTTGAAGAAAGGTCTGTTGTGAAACCACCGTCCTCCCCCATGAAGCTGAATGTGCTTTCAAACAACAACAACAACACTGTTTATCGAAATGTTGGTCCTCTCGGTCCTTTCACTGGTTATGCCACGATTTTGAAGAGTTCAAGGTTCTTGAGGCCGTGCCAACAACTGTTAGATGAGTGGTGCTGTCAATCGGGTTCAAAATTTGCAAAGAGAGGGGTTTGTGATGTTCCAGAGTGGGTCTCTCGAGATGTCAGTGCTGCTTCTACTTCTGCTACTGCTCTTAATGTTGATGAAAGTGCTGCTGCAAAAGGTGGTGGCAATTCGGGTGCTTCATCCTCTATGTTGTATAGTTCAatcgaaaacaataataataataatagtaataataataataatagcgctgatggcggagccgcgagtagcttttgtctttcttctcggccagagtgccaaaagaacaaggcaaaacTACTGTACATGCAAGAGGAGGTTACTAGGAGATACAAGCAATACCATCAACAAATGCAGATGGTTGTTCAATCATTCGAGTCAGTGGTGGGTCTTAGTTCGGCTACCCCGTACGTCTCCTTGGCTCTCAAGTCAATATCAAAACACTTCAGGTGCCTAAAAAATGCAATCTCAGATCAACTGAAGCTTACATGTGAAGTCTTGGGAGAGGACTATTCAATACCAACCACAAGTACTGGTAGTAAATTTGACAACAATGTGGCCAGGCTAAGGTGCATGGACCAAAACTTTCAAAAAAACAAATCTGGCGGGGCTAACATAAACTTTCTTGAGCCCCAACAACACGTATGGAGGCCCCAGAGGGGCTTACCAGAACGCTCCGTGGCAATTCTTAAAGCTTGGTTATTTGAGCATTTTCTTCATCCTTACCCCACGGACACTGATAAACACATGTTGGCTACCCAAACGGGTCTATCACGAAACCAGGTATCAAATTGGTTCATAAATGCTCGAGTCCGCGTGTGGAAGCCAATGGTTGAGGAAATACACATGCTTGAAACAAAAGGCGCAACAGAAGCCCACCAACACCAAACCTCTAGTAAAAATGACCAGTTAGCTTCTGCCTCTGAAGGCAGCAACAACCAGCTCAAATCTGATAACCAACCTGCTCACGAGTTTGGCGCGCATGCATTGCATTCACATGCAATCCCTGAAAAGCAATTCCAGTGTTTGGAAATGGGGTCATCTTCCTTGGCTGGCAACGAGGAACAACACATGGGAATGGAAGAAGACCAATGGAGTCAAGAGAAGAGGTCAAAACTGGAGTGCCAGATTGCTTCAACACCAAGCATGGATGGGACAGTGATGGGGTTTATGCCATATCGAAGAAGTGGACTTGAGGGTCTTGGATCAGTGTCACTCACTTTGGGTCTTAGGCATGGTGTTGAAGGTGTGCAACAACAGCATTTGCAACAAGAGGAGGAGCTTAGGCGTCAATTTGGAGGGCATATGATCCATGATTTTGTGGGCTAG 2283 0.4218 MSSLRPELHVAQQLRRDKLRIQNSSQQHLQEFSNNNLEHLSLHPGFNLDLLQVRNVRNGNMLDEAAAALYSSEMITFSNPLSAPRNPLECQELMMAQYGSTSFPHSSSTKEQQCEPRNLGASGMVNYNGSNPNNNNSTFYSSELNNNVSSEMGNSEIQIQKQFGEIHYPPSSSSSPPLYHNALQDMAYGVWGGNNNNHGESVLHYGNNELRFGGASLWTHNNSALGFKKINNEQLHDTNHPHQGLSLSLSSNSQQQSSKPCFEERSVVKPPSSPMKLNVLSNNNNNTVYRNVGPLGPFTGYATILKSSRFLRPCQQLLDEWCCQSGSKFAKRGVCDVPEWVSRDVSAASTSATALNVDESAAAKGGGNSGASSSMLYSSIENNNNNNSNNNNNSADGGAASSFCLSSRPECQKNKAKLLYMQEEVTRRYKQYHQQMQMVVQSFESVVGLSSATPYVSLALKSISKHFRCLKNAISDQLKLTCEVLGEDYSIPTTSTGSKFDNNVARLRCMDQNFQKNKSGGANINFLEPQQHVWRPQRGLPERSVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGATEAHQHQTSSKNDQLASASEGSNNQLKSDNQPAHEFGAHALHSHAIPEKQFQCLEMGSSSLAGNEEQHMGMEEDQWSQEKRSKLECQIASTPSMDGTVMGFMPYRRSGLEGLGSVSLTLGLRHGVEGVQQQHLQQEEELRRQFGGHMIHDFVG 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00691 760 SUPERFAMILY Homeodomain-like 536 600 IPR009057 -
Gma12g00691 760 Gene3D - 537 599 - -
Gma12g00691 760 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 8 31 732 - -
Gma12g00691 760 ProSiteProfiles 'Homeobox' domain profile. 531 594 IPR001356 GO:0003677
Gma12g00691 760 MobiDBLite consensus disorder prediction 235 279 - -
Gma12g00691 760 CDD homeodomain 534 595 IPR001356 GO:0003677
Gma12g00691 760 MobiDBLite consensus disorder prediction 606 638 - -
Gma12g00691 760 SMART HOX_1 534 598 IPR001356 GO:0003677
Gma12g00691 760 Pfam Associated with HOX 304 475 IPR006563 -
Gma12g00691 760 MobiDBLite consensus disorder prediction 237 262 - -
Gma12g00691 760 MobiDBLite consensus disorder prediction 101 116 - -
Gma12g00691 760 MobiDBLite consensus disorder prediction 101 136 - -
Gma12g00691 760 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 31 732 - -
Gma12g00691 760 MobiDBLite consensus disorder prediction 608 638 - -
Gma12g00691 760 SMART prehox3 299 476 IPR006563 -
Gma12g00691 760 Pfam Homeobox KN domain 551 590 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00691 Gma-Chr12 6123907 6129774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00691 381 603 Homeobox Transcription Factor Family AT4G34610 51.111 2.93e-67 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Gma12g00691 POX 1.6e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00691 - - gmx:100793050 1439.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00691 12 6123907 6129774 Gma12g00691 12 6123907 6129774 ECH
Gma12g00691 12 6123907 6129774 Gma11g01618 11 17441872 17447527 GST
Gma13g02884 13 43408623 43414486 Gma12g00691 12 6123907 6129774 PCT
Gma12g01661 12 36849248 36855129 Gma12g00691 12 6123907 6129774 PCT
Gma12g00691 12 6123907 6129774 Gma13g02884 13 43408623 43414486 PCT
Gma12g00691 12 6123907 6129774 Gma12g01661 12 36849248 36855129 PCT