Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00688 ATGGGAGGAAGGGCCTACTTCCCGAGACAGACAACACATAAGATATTGAATATGATTGGTGCATGCTCAGCTCAATTGTCTTACGACCAAAATAATTGTACTTCAAATGAAATTGGGCAAGGGACAAGGTACAGTTGCAAGTCAACGAAGGATTCATGCAGAACATTCTTGGTGTATAGAGCAAATAAGCATTTGAACACCATTTCAGAAGTCTCAAAGCTCTTCAACACGAACTCTGATGAGGTGCTTCTGAAAAACAACCTCACACCTCTTTCTTTGTTTGATGAACTCAAACAAGGTAAAGAGGTGCTTATTCCTGTTAATTGCACCTGCTCTGGAGGGTATTTTCAAGCCAGTTTAAGCTATAAAGTCCTTAACAACACGACATATTCCGAGATTGCTTGTGGTGTTTTTGAAGGGCTGCTGAAACATCTCACACTGGCTGAGGAAAACATTTCACAAGGTAATAAACCAGAAGCTGGTTCTGAGCTTCGTGTGCCTCTCATGTGTGCTTGTCCTGACAGTTACAATTTCACAAGGAGCATGAAGGTGAAGTACCTTGTCACATACCCCCTAATACTAGGAGATGATCCTGACAAATTGAGTGAAAAATTTGGCATCTCAACTGAAGAATTCTATGCAGTTAATAGCTTGAATCCCTTTTCAACGGTTTATCCTGATACAGTTGTTTTTGTTCCAATAAAGGATGGTCCAATCAGAATACATGATATTCCTGATTCTCCTTCTCCACCTCCTGGTTTTCTTTCCACAAATCCAGTGGTTACGACCGAGGAATCCACACAATCATCGAATTTGTACATTGCAGGATCGGTTATAGGATTCTTTTTGTTCATAACATTGCTTGCTAGTGGATTGTACATGAAGAGAATCAGGAAAAGTGATGATGTCCATTCCATTAGTCAAACAAACTCCCTCACTTTGTGGTCACCAACTAGAAGCTCTCATATATCTACCCAAACCGGTAAAAACTCTACTACTTGGTGCCTTTCCCCAGATCTTCTTGTTGGAATAAAGTACTACTTACTCAATTACAGCATGGAAGAGCTCCAAAAGGCCACCAACAATTTCAGTGAAGAAAACAAGATCGGTCACAACCGGGGTCGCGAAGGTGACTTTGTCTACAAGGGCTCAGTCAATGATCATGAGGTGATGATAAAGAGGATGAGGTTGGAAGACACACAACAGGTGATTGATTTACATTCTAAAATCAACCACATTAATATTGTGAACTTGCTTGGTGTTTGTTATGTTGGTAAGAGCAATAAAGATCCATGGTCTTATTTAGTTTTTGAGTTGCCTAAGAATGGATGCCTGAGGGACTGCTTATCTGATCCATGCAATCCAATAAATTGGTACAAAAGGACACAAATAGCCTTTGATATTGCAACATGTCTTTACTATTTACATTGCTGTTCTTTTCCTTCCTATGCTCACATGAACATTAGTAGTAGAAATATATTCATAACAGCAAATTGGAGGGGAAAACTGGCAGACGTTGGAAGAGCATTGGCTGCTAGTGTCACACTCACACCTACCAAAAGAAATAGTGTGGAAATTCCCAAAGGATTGGTGGCACCAGAATACCTCTTACATGGCTTGGTTTCTGAAAAAGTGGACATTTTTGCATTTGGGGTTGTTTTGCTTGAGTTGATCTCAGGAAGAGACAACTTTGATGGAAAACCAATCAAAGATTCCCTTGGATTTTTGTTGGGGGAAGCCAGTGAAGGGGGTTGTTTTGAAGGGTTAAGGAGCTTCATGGATCCTAATTTGAAGGATTACTCTCTTCCAGAGGCTTTATGTTTGTCTTTCTTAGCAAAGGATTGTGTGGCAGATGATCCCCTGCATAGGCCATCCATGGATGATATCATGAAAGTCCTTGCAAAAATGGTGTAG 1914 0.4044 MGGRAYFPRQTTHKILNMIGACSAQLSYDQNNCTSNEIGQGTRYSCKSTKDSCRTFLVYRANKHLNTISEVSKLFNTNSDEVLLKNNLTPLSLFDELKQGKEVLIPVNCTCSGGYFQASLSYKVLNNTTYSEIACGVFEGLLKHLTLAEENISQGNKPEAGSELRVPLMCACPDSYNFTRSMKVKYLVTYPLILGDDPDKLSEKFGISTEEFYAVNSLNPFSTVYPDTVVFVPIKDGPIRIHDIPDSPSPPPGFLSTNPVVTTEESTQSSNLYIAGSVIGFFLFITLLASGLYMKRIRKSDDVHSISQTNSLTLWSPTRSSHISTQTGKNSTTWCLSPDLLVGIKYYLLNYSMEELQKATNNFSEENKIGHNRGREGDFVYKGSVNDHEVMIKRMRLEDTQQVIDLHSKINHINIVNLLGVCYVGKSNKDPWSYLVFELPKNGCLRDCLSDPCNPINWYKRTQIAFDIATCLYYLHCCSFPSYAHMNISSRNIFITANWRGKLADVGRALAASVTLTPTKRNSVEIPKGLVAPEYLLHGLVSEKVDIFAFGVVLLELISGRDNFDGKPIKDSLGFLLGEASEGGCFEGLRSFMDPNLKDYSLPEALCLSFLAKDCVADDPLHRPSMDDIMKVLAKMV 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00688 637 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 15 636 - -
Gma12g00688 637 SUPERFAMILY Protein kinase-like (PK-like) 345 633 IPR011009 -
Gma12g00688 637 Gene3D Transferase(Phosphotransferase) domain 1 441 637 - -
Gma12g00688 637 ProSiteProfiles LysM domain profile. 188 232 IPR018392 -
Gma12g00688 637 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 15 636 - -
Gma12g00688 637 Pfam Protein tyrosine and serine/threonine kinase 387 571 IPR001245 GO:0004672|GO:0006468
Gma12g00688 637 ProSiteProfiles Protein kinase domain profile. 282 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00688 637 Gene3D Phosphorylase Kinase; domain 1 344 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00688 Gma-Chr12 6104570 6106926 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00688 44 637 Receptor kinase-like Gene Family AT2G23770 28.642 4.57e-68 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gma12g00688 PK_Tyr_Ser-Thr 1.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00688 - - gmx:100818937 1247.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00688 12 6104570 6106926 Gma12g00688 12 6104570 6106926 ECH
Gma12g00688 12 6104570 6106926 Gma11g01624 11 17510666 17512588 GST