Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00668 atgaagacgctccagaaagagttctaccagattctatcctccaacagggaacacttggaccccgaaaccgtcaccacgcgctcctccgtcgacctccgcagcgtctccgattacgtctccgattacgacgacgaaatctcaatcaccgaggacgagttccgcgtctccgagaccgagcgagtttccatgctcgccatggaggatttgaaagccatagccgaatccatgatttcctccggctacggcaaggagtgcgtcaaggccgttacgtcgatggtgaaactcggcgacgccgttagaacgatgctaacggacttggaaaccgcgattcagaaggagtcctcgaagaaaccagtccctggcggtggagtccaccctctcacgcgctacgtgatgaactacctcactttcctcgccgattacagcggcgtgctggtcgatataatcgccgatttgccgcaatccccgttgccggagtcttactaccgcagcccgatGCGCGAGGAAAACCCGCCGGCTTCGGAGCTATCGGAGCGAATCGCGTGGATCATACTCGTGGTGCTCTGCAAGCTCGACGGCAAAGCGGAACTCTACAAGGACGTGGCGCATTCTTACCTGTTCCTCGCGAATAACATGCAATACGTCGTCGTAAaggtgcgcaagtcgaacctagggtttcttctcggcgaggagtggttggacaagcataagttgaaggttagagagtacgcgtccaagtacgagcgagtcgggtggagcgcggtgtttTCTGCGTTGCCGGAAAATCCCGCGGCGGAGTTGACGGCGGAGCAGGCCAGGGCGTGCTTCGTGAGGTTCGACGCTGCGTTTCATGAAGCGTGTAGAAAACAGGCCTCGTGGTTCGTATCCGACCCGAAATTTCGTGATGAAATCAAAGGGTCGATAGCTTCGAAGCTGGTGCAAAAGTACAGCGAGTTCTACGAGAAGAATCGGGTCGGGTCGGAATCCGTTAGGGGTTTTTTACCCGACGATATAGGGAAATACCTGTCTAACATTTTGTGTAATGGAGATTCGGGCAGTGTCTCGTCACACTCTTCGTCAACGACGTCGTCTTCCCATCGCTCTAATCGACGGTGA 1116 0.2419 MKTLQKEFYQILSSNREHLDPETVTTRSSVDLRSVSDYVSDYDDEISITEDEFRVSETERVSMLAMEDLKAIAESMISSGYGKECVKAVTSMVKLGDAVRTMLTDLETAIQKESSKKPVPGGGVHPLTRYVMNYLTFLADYSGVLVDIIADLPQSPLPESYYRSPMREENPPASELSERIAWIILVVLCKLDGKAELYKDVAHSYLFLANNMQYVVVKVRKSNLGFLLGEEWLDKHKLKVREYASKYERVGWSAVFSALPENPAAELTAEQARACFVRFDAAFHEACRKQASWFVSDPKFRDEIKGSIASKLVQKYSEFYEKNRVGSESVRGFLPDDIGKYLSNILCNGDSGSVSSHSSSTTSSSHRSNRR 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00668 371 Gene3D Exocyst complex component Exo70 90 351 - -
Gma12g00668 371 PANTHER EXOCYST COMPLEX PROTEIN EXO70 89 353 IPR004140 GO:0000145|GO:0006887
Gma12g00668 371 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 88 IPR004140 GO:0000145|GO:0006887
Gma12g00668 371 MobiDBLite consensus disorder prediction 351 371 - -
Gma12g00668 371 Gene3D Exocyst complex component Exo70 1 89 - -
Gma12g00668 371 Pfam Exo70 exocyst complex subunit 66 343 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gma12g00668 371 SUPERFAMILY Cullin repeat-like 1 344 IPR016159 -
Gma12g00668 371 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 89 353 - -
Gma12g00668 371 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00668 Gma-Chr12 5808418 5809947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00668 1 94 EXO70 exocyst subunit family AT5G59730 40.206 1.75e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00668 K07195 - gmx:100810579 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00668 12 5808418 5809947 Gma12g00668 12 5808418 5809947 ECH
Gma12g00668 12 5808418 5809947 Gma11g01311 11 11206055 11208228 GST