Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00661 ATGTACACACACCGCAACGCCTCACTCTCACGCGCCGCCGACTCCCTCGGCCATTTCCTCTCTCCCCCGGACGCATCCACGGCGTCACCAATGCAGTACTCTCCCGCCGCCGCCGCCGCCGCCGCTCCTCCTCCCCTTCACCACCACCACCACGGCGAGTTCGACTCGCTGCTCGAACTCAATTACTCGGAGATGAGTTCGAACAACACGTACAACAGCTGCAGCAGCGGGTGCACGAGCTACATGGGGTCGCCGAGTTCGCTGGCGAGTAATTACGAGAGTCGACGAGTAGTGCAGAGGAGCGTTAGCAGCCACTCGCTGCAAAAGAACGGTGGGACCCACCACCATCCCTTTTCTGAGTTCTCTCCTCTTTTCGCTGAGTTCATTGACTCGGAAAACGGTCCCGTACGGAGAGCTTGCAGTACCGGTGACCTTCAGAGATTCAATGGAATGCAACATTTTCAGCATTCTGATAGCTCATTGTCAAGTGAAAGTAGTTTGATCATAGAAGAAATGAGCAGAACCAGTCCTTATAGCCCAGAGGAGAAGAAGGTGAGGATTGAGAGATATAGGAACAAGAGAAACCAGAGGAACTACTGCAAGAAAATTAAGTATGCTTGCAGAAAGACATTGGCAGATAGCAGGCCACGTATCAGAGGGCGATTTGCAAGGAATGGCGAAATTGCAATTAACCCTCCAGCTCAGTGGAGTCACATGGGAAATGGAGAGGAAGAGGAAGAAGAGGAAGAGAATTGGGCTAATTTCTTTGATTCCTTAGTTCCTGCAAATCTTGCTCAGGAGCCTCAAGGCAGTAGTTCCTCCTTTGGTGTGTTCTATTAA 840 0.5167 MYTHRNASLSRAADSLGHFLSPPDASTASPMQYSPAAAAAAAPPPLHHHHHGEFDSLLELNYSEMSSNNTYNSCSSGCTSYMGSPSSLASNYESRRVVQRSVSSHSLQKNGGTHHHPFSEFSPLFAEFIDSENGPVRRACSTGDLQRFNGMQHFQHSDSSLSSESSLIIEEMSRTSPYSPEEKKVRIERYRNKRNQRNYCKKIKYACRKTLADSRPRIRGRFARNGEIAINPPAQWSHMGNGEEEEEEEENWANFFDSLVPANLAQEPQGSSSSFGVFY 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00661 279 ProSiteProfiles CCT domain profile. 183 225 IPR010402 GO:0005515
Gma12g00661 279 MobiDBLite consensus disorder prediction 20 50 - -
Gma12g00661 279 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 51 279 IPR045281 GO:0009909
Gma12g00661 279 PANTHER CCT MOTIF PROTEIN 51 279 - -
Gma12g00661 279 Pfam CCT motif 185 225 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00661 Gma-Chr12 5683570 5686297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00661 174 224 C2C2-CO-like Transcription Factor Family AT5G24930 49.020 6.75e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma12g00661 CCT 3.3e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00661 - - gmx:102667610 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00661 12 5683570 5686297 Gma12g00661 12 5683570 5686297 ECH
Gma12g00661 12 5683570 5686297 Gma11g01319 11 11318930 11321613 GST
Gma13g02952 13 44096467 44098782 Gma12g00661 12 5683570 5686297 PCT
Gma12g00661 12 5683570 5686297 Gma13g02952 13 44096467 44098782 PCT