Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00657 ATGGGTTGGTTTTGTTGCCCAGGGAAATCAAGCAAAAAATCGGTTACCGAAGACTACAGCGACACCCTCAACCAGAAACCCATCAATTTCACTGCCACAGATAGTGTCAAAGTTGATTTCAGAGTGAATGGGAATAAGGAAGATGGTTCTAAAGGTGATCAACTTGCTCTGGACGTAAAGAGTTTAAATTTGAAAGAGGAGGCTTCTCAGGATAGAAAAGATAATGGTAATCGGGCACAGACATTCAGTTTTAATGAACTTGAAGCTGCGACGGGAAGTTTTAGGTTGGATTGTTTTTTGGGTGAAGGAGGCTTTGGCAAGGTTTACAAGGGACACTTGGAGAGAATAAACCAGgttgtagctataaagcaaCTTGACCCTAACGGACTTCAAGGGATTCGTGAATTTGTTGTTGAAGTGTTGACGTTGAGTTTGGCAGATCACCCTAACCTTGTGAAGTTGATTGGATTTTGTGCTGAGGGAGAGCAGAGGCTATTAGTTTATGAGTACATGCCATTAGGATCTTTGGAGGACCATTTGCTTGATATTCGGCCAGGTAGaaaaccacttgattggaacacaagaatgaaaatagcagctggtgcagctaggggtttggagtatctgcatgataaaatgaagcctcctgtaatatatcgcgatttgaaatgttctaacattttgttaggagagggatatcatcctaaattgtccgattttggcttggcaaaagtaggcccaagtggtgataagacccatgtttcaacaagggttatgggcacatatgggtattgcgccccagattatgcaatgacaggccagttgacattcaagtcagatatttacagcttcggggttgttcttttggagcttattacaggccggaaagccattgaccatacaaaacctgccaaagaacaaaatctagttgcatggGCAAGACCCTTGTTCAGAGATAGGAGAAAATTTTCGCAAATGGTTGACCCATTACTTGAAGGTCAATATCCCGTGAGAGGCCTATACCAAGCTCTTGCCATTGCTGCTATGTGTGTTCAAGAGCAGCCTAATATGCGGCCTGTAATAGTTGACGTGGTTACAGCTCTAAATTACCTAGCTTCTCAGAAGTATGATCCCCAACTTCATCCAGCACAAACTTCTAGAAGGAGTCCACCTTCTCAGATGATGAAAAGGGATGATGATGATCATAGACATATTTTAAGCATCGAGCATGAGACAGACAGATCTTAA 1248 0.2925 MGWFCCPGKSSKKSVTEDYSDTLNQKPINFTATDSVKVDFRVNGNKEDGSKGDQLALDVKSLNLKEEASQDRKDNGNRAQTFSFNELEAATGSFRLDCFLGEGGFGKVYKGHLERINQVVAIKQLDPNGLQGIREFVVEVLTLSLADHPNLVKLIGFCAEGEQRLLVYEYMPLGSLEDHLLDIRPGRKPLDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHTKPAKEQNLVAWARPLFRDRRKFSQMVDPLLEGQYPVRGLYQALAIAAMCVQEQPNMRPVIVDVVTALNYLASQKYDPQLHPAQTSRRSPPSQMMKRDDDDHRHILSIEHETDRS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00657 415 MobiDBLite consensus disorder prediction 379 415 - -
Gma12g00657 415 MobiDBLite consensus disorder prediction 392 415 - -
Gma12g00657 415 SMART serkin_6 94 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00657 415 PANTHER OS07G0668900 PROTEIN 1 401 - -
Gma12g00657 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Gma12g00657 415 ProSiteProfiles Protein kinase domain profile. 94 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00657 415 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Gma12g00657 415 SUPERFAMILY Protein kinase-like (PK-like) 80 392 IPR011009 -
Gma12g00657 415 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 1 401 - -
Gma12g00657 415 CDD STKc_IRAK 100 369 - -
Gma12g00657 415 Pfam Protein kinase domain 99 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00657 415 Gene3D Transferase(Phosphotransferase) domain 1 171 388 - -
Gma12g00657 415 PIRSF ILK 85 380 - -
Gma12g00657 415 PIRSF ILK 29 91 - -
Gma12g00657 415 Gene3D Phosphorylase Kinase; domain 1 63 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00657 Gma-Chr12 5615481 5619900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00657 60 373 Glycoside Hydrolase AT3G07070 62.975 5.26e-147 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gma12g00657 Pkinase 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00657 - - gmx:100804000 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00657 12 5615481 5619900 Gma12g00657 12 5615481 5619900 ECH
Gma11g01323 11 11397326 11401569 Gma12g00657 12 5615481 5619900 ECH
Gma12g00657 12 5615481 5619900 Gma11g01323 11 11397326 11401569 GST
Gma13g02945 13 44015822 44019160 Gma12g00657 12 5615481 5619900 PCT
Gma15g00418 15 3520669 3524329 Gma12g00657 12 5615481 5619900 PCT
Gma12g00657 12 5615481 5619900 Gma13g02945 13 44015822 44019160 PCT
Gma12g00657 12 5615481 5619900 Gma15g00418 15 3520669 3524329 PCT