Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00607 ATGCTCAATAAGACTCTTTCTTTTGCGATGGGGTGCTGTAGTTGCTTTGGGTTCATCAGGACACCTAACCGTCAAAGTCAAAGGTCTAAGCCTACTACTAACAATAATCTCTGCCAGGAGCCTCTGTTGGATGATGATATTGAGGATGAAGAGGGTGAGCCTTTGTACAATGATGAGGTTACTAACAATAGTGGAGATGAAGGTGCGGAGGAAACTCGTCCCAAGCGATCTGAAGAAATTTTGAACTTCAGAGTAGAGAATGGCATGATTTGTAGGCAGTTTCCAGTTAAGGAAACTCGCAAACTTGTTCGCAGCGAGGATGAAAATGGGAACAAGATGATAAATGAGTATATTCGTGAGTATAAGATTGGTTCTGGTAGCTATGGGAAAGTGGCTCTTTATCGAAGCTCTGTTGATGACAAGCATTATGCAATTAAGGCCTTTCATAAATCTTATTTACTGAAGCTTCGAGTTGCACCCTCAGAAACTGCCATGATGGATGTACTACGTGAGGTTCTCATTATGAAAATGCTGGAACATCCTAATATAGTCAATCTCATTGAGGTGATTGATGACCCAGAGACGGACAACTTCTACATGGTACTTGAATATGTTGAAGGAAAATGGATTTGTGAGGGTTCAGGTCCCACTTGTGGCTTAGGTGAAGAGACTGCTAGGAGATACTTGCGTGATATAGTTTCTGGATTAACATATCTCCATGCTCATAATATAGTACATCTGGATATTAAGCCAGATAATCTGTTGATTACTTGTCATGGTACAGTAAAGATAGGGGATTTCAGTGTCAGCCAGGCTTTTGAGGATGATAAAGATGAGCTTCGGCGATCACCTGGCACTCCTGTTTTCACTGCACCAGAATGTATTTTAGGTGGTGTGAAATATGGTGGTAAAGCTGCAGACACGTGGGCAGTAGGAGTTACTTTATACTGTATGATATTGGGTGAATACCCTTTTCTTGGAGACACCCTTCAAGATACATATGACAAAATAGTCAATAATCCTTTAGTACTCCCCAACGACATGAATCCACCATTGAAAAACTTAATAGAAGGACTTCTTTCCAAAGACCCAAGTTTAAGGATGACTTTGGGTGCTGTTGCGGAAGATAGCTGGGTTATTGGAGATGATGGTCCAATTCCTGATTACCTTTGTTGGTGCAAAAGGAAGAGCTTGGGAATTGAGGACAATGATGAGAGCAATACTGACTAA 1230 0.4122 MLNKTLSFAMGCCSCFGFIRTPNRQSQRSKPTTNNNLCQEPLLDDDIEDEEGEPLYNDEVTNNSGDEGAEETRPKRSEEILNFRVENGMICRQFPVKETRKLVRSEDENGNKMINEYIREYKIGSGSYGKVALYRSSVDDKHYAIKAFHKSYLLKLRVAPSETAMMDVLREVLIMKMLEHPNIVNLIEVIDDPETDNFYMVLEYVEGKWICEGSGPTCGLGEETARRYLRDIVSGLTYLHAHNIVHLDIKPDNLLITCHGTVKIGDFSVSQAFEDDKDELRRSPGTPVFTAPECILGGVKYGGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNNPLVLPNDMNPPLKNLIEGLLSKDPSLRMTLGAVAEDSWVIGDDGPIPDYLCWCKRKSLGIEDNDESNTD 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00607 409 SUPERFAMILY Protein kinase-like (PK-like) 108 385 IPR011009 -
Gma12g00607 409 Pfam Protein kinase domain 119 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00607 409 MobiDBLite consensus disorder prediction 24 40 - -
Gma12g00607 409 Gene3D Transferase(Phosphotransferase) domain 1 216 385 - -
Gma12g00607 409 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 409 - -
Gma12g00607 409 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 1 409 - -
Gma12g00607 409 MobiDBLite consensus disorder prediction 53 77 - -
Gma12g00607 409 MobiDBLite consensus disorder prediction 24 43 - -
Gma12g00607 409 CDD STKc_LKB1_CaMKK 123 379 - -
Gma12g00607 409 Gene3D Phosphorylase Kinase; domain 1 111 214 - -
Gma12g00607 409 ProSiteProfiles Protein kinase domain profile. 117 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00607 409 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Gma12g00607 409 SMART serkin_6 117 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00607 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00607 Gma-Chr12 5106611 5112535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00607 123 386 CBL-interacting serine-threonine protein kinases AT5G35410 34.340 1.40e-42 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Gma12g00607 Pkinase 7.3e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00607 K00908 - gmx:100789178 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00607 12 5106611 5112535 Gma12g00607 12 5106611 5112535 ECH
Gma12g00607 12 5106611 5112535 Gma11g01652 11 17871702 17876740 GST