Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00570 ATGGCGAAAACGCTCATTTCGTCTCCATCGTTCATCGGCACGCCGCTCCCCTCGCTCCCTCGCCACCACCTCCCCCACCGCACCAGGTTTGTCACTACCAAAGTCCACGTCAGCCTCCATGAAATTCCCCCTATTCAATCCTTAAGCCACTCCATTGACTTCGCCGGAATCGTTACCAGAGCCGAAGGCCTTCTCTACACGCTCGCCGATGCCGCAgttgcggcggaccctgcggttgcagcggacactgcggCTTCCACCACCGATGCTGCCGTACAGAAGAGCGGAGGTTGGTTCGGCTTCATCTCCGAAGCTATGGAGTTCGTTCTCAAGGTGTTGAAGGATGGTCTTTCTGCCGTGCATGTCCCTTATGCATATGGATTTGCTATCATATTGCTCACTGTTATAGTTAAGGCAGCGACGCTTCCCCTGACAAAGCAACAGGTTGAATCTACATTGGCTATGCAAAATCTTCAACCAAAAATTAAGGCCATTCAAGATAGATATGCTGGCAATCAAGAAAGAATACAACTTGAGACGTCAAGGCTATATCGGCAGGCTGGGGTTAACCCACTGGCAGGTTGTTTACCAACTTTGGCTACAATTCCAGTCTGGATTGGTCTCTACCAAGCTTTATCAAATGTGGCAAATGAGGGACTGCTAACCGAAGGTTTTCTTTGGATCCCCTCTTTGGGTGGTCCTACTACCATTGCTGCTAGACAAAGTGGAGCTGGAATCTCTTGGCTTTTTCCATTTGTGGACGGACATCCACCTTTGGGTTGGCAAGATACTGCAGCATATCTTGTTTTACCTATTCTTCTTGTCGTTTCTCAATACGTTTCAATGGAAATCATGAAACCACCTCAGACAGATCCTTCTCAAAAGAATCAACTTCTTATTTTAAAGTTTCTTCCACTCATGATTGGCTACTTCTCATTATCTGTCCCATCTGGACTAACAATTTACTGGTTTATAAACAATGTCCTGAGCACAGCTCAACAAGTATGGTTGCGAAAATTGGGAGGTGCAAAGCCTGTTGTGAATGAAAATGCTGGTGGGATTATTACTGCAGGACGTGCTAAAAGATCAGATTCGCAGCTAGCAAGGAATGGTGAAAGGTTTAAGCAGTTAAAGGAAGAGGAAAAGAAGAAAAAGGTAAGCAAGGCACTGCCAGTGGAAGAAGTTCAGTCACTGGCTTCTGTTTCTGCTTCTGATGATGGCTCAGATACAGAAAGTGACAATAAGGGACAGGAAGATGCAGAAGAAGCATACGCTTCTAAAGTTGGCGAAGAGGTTCAAAATTATTCTAGGGAAAGAAGAAGCAAGCGTTCGAAGCGGAAGCGTGCTGTATAA 1353 0.4457 MAKTLISSPSFIGTPLPSLPRHHLPHRTRFVTTKVHVSLHEIPPIQSLSHSIDFAGIVTRAEGLLYTLADAAVAADPAVAADTAASTTDAAVQKSGGWFGFISEAMEFVLKVLKDGLSAVHVPYAYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQDRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWQDTAAYLVLPILLVVSQYVSMEIMKPPQTDPSQKNQLLILKFLPLMIGYFSLSVPSGLTIYWFINNVLSTAQQVWLRKLGGAKPVVNENAGGIITAGRAKRSDSQLARNGERFKQLKEEEKKKKVSKALPVEEVQSLASVSASDDGSDTESDNKGQEDAEEAYASKVGEEVQNYSRERRSKRSKRKRAV 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00570 450 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 444 - -
Gma12g00570 450 MobiDBLite consensus disorder prediction 397 450 - -
Gma12g00570 450 MobiDBLite consensus disorder prediction 408 438 - -
Gma12g00570 450 PANTHER OXA1 1 444 IPR001708 GO:0016021|GO:0032977
Gma12g00570 450 Pfam 60Kd inner membrane protein 126 339 IPR001708 GO:0016021|GO:0032977
Gma12g00570 450 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 126 338 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00570 Gma-Chr12 4785934 4795416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00570 22 395 Chloroplast and Mitochondria Gene Families AT2G28800 68.947 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00570 K03217 - gmx:100817173 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00570 12 4785934 4795416 Gma12g00570 12 4785934 4795416 ECH
Gma12g00570 12 4785934 4795416 Gma11g01275 11 10881263 10886546 GST