Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00568 ATGGAGAGTGGGAATAATAATGATGAGGAGTTGGATATGGAGATGGAGATGGGAGGGAGTAATGTAAATGGAAATGGGGGGGTTGCAGGGAGTAGTTCGCGGTGGAACCCTACAAAAGAGCAAATAAGCATGCTAGAGAATTTGTATAAGCAGGGAATAAAGACTCCCAGTGCTGAGGAGATACAGCAGATAACTGCTAGGCTTAGGGCGTATGGTCACATCGAAGGAAAGAATGTCTTCTACTGGTTTCAGAACCACAAAGCTAGGCAGAGACAGAAGCAGAAGCAAGAAACCTTCGCTTACTTCAATCGCTTTCTTCATACGCCTCAACCATTCTTTTCTCCGCCAATTTGCCCAAATGCCATGTGTGCCCCATATTACATACCTCAGGCACAGGGTGAAATTGGGTTTTATCACCCACATCCAAAGGTGCTTGTACCCGTAGGTTTTAGGAGGAGCCCCTCTGAGAAAGTTGTGCCCACAGGCATGCATCAAATGCAACAGAGAATCTCGGATTGCTGTAACTCTCACTACAGTAACCAAGAAACGTTGGATCTTTTCCCTCTGCACCCAACTGGCATTTTGGAAGGGAAAACGACAACAACAACAGACCAGGTGCCTTCTCTGGCTTCAGTTTCTGCTGATAGTTCCACTGATACACCTTCTGCTGCGGCTTCTCCTGATCATATCAATGAAGATCATGATCATGCTTCCCCACTCAACCAACCCTTCTTTGATTTTTTTACTACTTCTGGACAAGGTTCTTATTAA 771 0.454 MESGNNNDEELDMEMEMGGSNVNGNGGVAGSSSRWNPTKEQISMLENLYKQGIKTPSAEEIQQITARLRAYGHIEGKNVFYWFQNHKARQRQKQKQETFAYFNRFLHTPQPFFSPPICPNAMCAPYYIPQAQGEIGFYHPHPKVLVPVGFRRSPSEKVVPTGMHQMQQRISDCCNSHYSNQETLDLFPLHPTGILEGKTTTTTDQVPSLASVSADSSTDTPSAAASPDHINEDHDHASPLNQPFFDFFTTSGQGSY 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00568 256 CDD homeodomain 34 94 IPR001356 GO:0003677
Gma12g00568 256 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 15 253 - -
Gma12g00568 256 SUPERFAMILY Homeodomain-like 30 100 IPR009057 -
Gma12g00568 256 MobiDBLite consensus disorder prediction 196 225 - -
Gma12g00568 256 Pfam Homeodomain 32 92 IPR001356 GO:0003677
Gma12g00568 256 ProSiteProfiles 'Homeobox' domain profile. 28 93 IPR001356 GO:0003677
Gma12g00568 256 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 15 253 IPR044555 GO:0003700|GO:0099402
Gma12g00568 256 MobiDBLite consensus disorder prediction 196 244 - -
Gma12g00568 256 Gene3D - 32 101 - -
Gma12g00568 256 MobiDBLite consensus disorder prediction 16 35 - -
Gma12g00568 256 SMART HOX_1 30 97 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00568 Gma-Chr12 4771422 4773109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00568 25 249 Wox Gene Family AT5G59340 42.912 2.99e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gma12g00568 Homeodomain 5.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00568 - - gmx:100817714 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00568 12 4771422 4773109 Gma12g00568 12 4771422 4773109 ECH
Gma12g00568 12 4771422 4773109 Gma11g01273 11 10860935 10862433 GST