Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00567 ATGGTTTTCTCCTCTATTCCAGTCTTTGTAGATCCTCCCAATTGGCAGCAGCAACCAAACCATCCTCAAGCAAGTAATAATGGTGGTGATAACTCCCAGCTTCTTCCACCTTTGCCACCACATCAACCTCATGTGGGAGGTTCTGTTGGTTCAATCAGGCCAGGTTCCATGGCAGATCGAGCTAGGCTAGCTAAGATACCACCACCAGAAGCAGCTCTCAAGTGTCCACGTTGCGATTCCACCAACACTAAATTTTGCTACTTCAACAACTATAGCCTCTCTCAACCACGCCATTTCTGTAAGACTTGTAGGCGCTATTGGACAAGTGGGGGTGCTCTAAGAAACGTTCCTGTGGGTGGAGGGTGCCGTAGGAACAAGAAGAACAAAAGGAGTCGCTCTAAGTCTCCTGCCTCATCGGAGAAACAAACACTTTCTGGTTCCACGAGTGCAACACCCTCTGGTGGAACCACTCATGAACTAGTTGGTCAGTTGCCACAGCCACCGAACCTTCCCTTCATGGCATCTCTTCAGAACCTTAACCGTTATGCTGTTGGAAACATGGGTCTCGGGTTGCGTGAGATTCACGGACAGAACGAGAACATGGGGTTTCAGATTGGTAATTCTTCAGCTGCTGGTGGAGGAATGGATCAGTGGCGCATACAACAGGTTCCTTTCTTGAATGGTTTTGAATCAACTTCTGCTGGTTCGTACCCTTTTCAAAATGAAGGGATTGAAACACCTTCTGGTTTTGGTGGAGACATAGCAACGAATTCTAGGGTTTCTCAGATGCCATCGGTTAAAATGGAAGAAAGTGGAGCTTTGAATTTGTCAAGATCAACACTCAATGTTTCAGAAAATAACCAATACTATTCATGGACTGATATGTCAGGTCTTGCTTCTTCTTCCGCTACTCATCTCTTGTAA 924 0.4621 MVFSSIPVFVDPPNWQQQPNHPQASNNGGDNSQLLPPLPPHQPHVGGSVGSIRPGSMADRARLAKIPPPEAALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTSGGALRNVPVGGGCRRNKKNKRSRSKSPASSEKQTLSGSTSATPSGGTTHELVGQLPQPPNLPFMASLQNLNRYAVGNMGLGLREIHGQNENMGFQIGNSSAAGGGMDQWRIQQVPFLNGFESTSAGSYPFQNEGIETPSGFGGDIATNSRVSQMPSVKMEESGALNLSRSTLNVSENNQYYSWTDMSGLASSSATHLL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00567 307 MobiDBLite consensus disorder prediction 117 168 - -
Gma12g00567 307 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 5 304 IPR045174 GO:0003700|GO:0006355
Gma12g00567 307 ProSitePatterns Zinc finger Dof-type signature. 75 111 IPR003851 GO:0003677|GO:0006355
Gma12g00567 307 ProSiteProfiles Zinc finger Dof-type profile. 73 127 IPR003851 GO:0003677|GO:0006355
Gma12g00567 307 MobiDBLite consensus disorder prediction 11 33 - -
Gma12g00567 307 Pfam Dof domain, zinc finger 72 127 IPR003851 GO:0003677|GO:0006355
Gma12g00567 307 MobiDBLite consensus disorder prediction 137 163 - -
Gma12g00567 307 MobiDBLite consensus disorder prediction 11 55 - -
Gma12g00567 307 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 5 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00567 Gma-Chr12 4755004 4756686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00567 40 306 C2C2-Dof Transcription Factor Family AT3G55370 44.295 7.94e-56 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma12g00567 zf-Dof 1.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00567 - - gmx:100816635 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00567 12 4755004 4756686 Gma12g00567 12 4755004 4756686 ECH
Gma12g00567 12 4755004 4756686 Gma11g01270 11 10834065 10835697 GST
Gma13g02990 13 44408979 44410619 Gma12g00567 12 4755004 4756686 PCT
Gma15g00376 15 3173919 3175010 Gma12g00567 12 4755004 4756686 PCT
Gma12g00567 12 4755004 4756686 Gma13g02990 13 44408979 44410619 PCT
Gma12g00567 12 4755004 4756686 Gma15g00376 15 3173919 3175010 PCT