Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00562 ATGGGAAACGGCATAGGGAAGCTAACGGTGTGCTTCACCGGAAACGGTGGAGGGGGTCGTCGGAAGCAGGATATATCCTTTTTAATAACGGAGCCGTTAGACGAGGGCTTGGGTCACTCTTTCTGTTACGTTCGACCCGACCCGACCCGGATTTCGTCGTCGAAGGTGCACTCGGAGGAAACGACGACGTTCAGAACAATCTCGGGCGCGTCGGTGAGTGCGAACACGTCAACGCCGTTATCGACGGCGTTTGTGGATTTGTACTCGTACAGTTGCATCGACAGAGCCGCGGCGTTTGAGAGTTCAACTTCCTTCGCGGCGTTGCCTCTTCAGCCGATTCCGAGGAACCTCGTGAACTCGGGCCCGTTCTCGGGGAACCTGAACGGTGGTGGGTTTCCGGGCTCGGGCCCGCTGGAAAGAgggttcatgtcgggcccaatcgagcgcgggttcatgtcggggcccatcgaccgcggACTTTTTTCGGGCCCGATGGAGAGGGAGGGGAACGGAATCGGAAACGGATCGGATCAATTTCAGAGAAGCTTCTCTCACGGAGGGTTGGGATTAGGGTTAGGTATGAGAGTGAGAACGAGGAAGGGTAGGTGGATTCGCGTTTTGCAGAGGGCAATTTCGAAGACTCTGTCTCGGGGGCAGAGTTCGATTGTAGCTCCGATCAAGGGCGTGGTGATGAAGGAGCCGGAGTGGATGGTGATGGCGGCGGCGGAGAAGCATAATGAGAATCTGAGCGTGAATCTGAGCAGTGAGGGGAGTTTGGAGGATGATGATTCGATGGAGAGTCAGAATCTTCAATGGGCGCAGGGGAAAGCAGGGGAAGATCGCGTTCATGTTGTGGTGTCTGAGGAACACGGTTGGGTTTTCGTGGGGATCTATGATGGTTTCAGTGGACCTGATGCACCTGATTACCTTCTCTCCAATCTCTACACCGCGGTGCATAAGGAGCTTAAAGGGTTGTTGTGGGATGATCGGTCTGCACCCGAAAATTCGATGCCGAAAGAGGACATGTTGCGAGATGTTACAACTGATGTTGCAGATTTTACGGTTGCTGATGAAGATGATGCTTGTTCTCACTGTGTTGAGCAAGATAATAATGATAATAATAGTAAGAGTGGTAATAAGAGAGGTAGGAATTCGAGGAACAAGTTCCAGGGTGCTGCAAAGAAATGGGAGGAGAATCAACGGAGGTGGAAGTGTGAGTGGGATAGGGAAAGATTAGAGCTTGATCGGAGATTGAAGGAGCAATTAAATTTAAGTCGATCTGGGTCAGGTGGAGCAGCGAGTTCTATTAATCATTCGGATGTTTTGGAAGCTCTATCTCGGGCTTTGAGGAAGACTGAGGAGTCTTATCTTGATGTCGCGGATAAGATGTTGATGGAGAATCCTGAATTGGCTTTGATGGGTTCTTGTGTTCTTGTGATGTTGATGAAGGGGGAGGATGTTTATGTGATGAATGTGGGGGATAGTCGCGCCGTGCTGGCTCAGAAGGTTGAGCCTGATTACTGGCTTGGGAAGATCAGGCAGGACTTGGAGAGGATCAATGAGGAGACAATGAATGACCTTGAATCTTGGGATGTTGATACCTCCAACTTGGTTCCGAGTTTGAGCGCGATTCAGCTTACCAAGGATCATAGTACTAGTGTTGAGGAAGAAATTCAGAAAATTAAAAAAGATCACCCGGATGATCCTTTTGCTGTTGTAAATGACCGTGTTAAGGGTTCTCTCAAGGTTACCCGAGCATTTGGTGCCGGATTTCTCAAACAGccaaagtggaacaacgcacttttggagatgtttagaatagactacgtaggaaactctccttacatAAGCTGCCTACCATATCTAAAACATCACAGATTAGGTCCAAAGGACAAATTTTTGATACTATGCTCCGATGGGCTCTACCAGTACTTGTCAAATGAAGAGGCAGTGGCTGAAGTTGAGCTTTTCATCACATTGCAACCTGAGGGAGACCCGGCTCAACATTTGGTTGAAGAAGTGTTGTTTCGTGCTGCAAAGAAAGCTGGTTTGGACTTTCACGAGTTGCTCGAAATTCCACAGGGTGATCGGCGACGTTACCATGATGATGTTTCCATCATTGTTATTTCTTTGGAGGGAAGGATATGGAGATCATGTGTATAA 2163 0.4619 MGNGIGKLTVCFTGNGGGGRRKQDISFLITEPLDEGLGHSFCYVRPDPTRISSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYSCIDRAAAFESSTSFAALPLQPIPRNLVNSGPFSGNLNGGGFPGSGPLERGFMSGPIERGFMSGPIDRGLFSGPMEREGNGIGNGSDQFQRSFSHGGLGLGLGMRVRTRKGRWIRVLQRAISKTLSRGQSSIVAPIKGVVMKEPEWMVMAAAEKHNENLSVNLSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFSGPDAPDYLLSNLYTAVHKELKGLLWDDRSAPENSMPKEDMLRDVTTDVADFTVADEDDACSHCVEQDNNDNNSKSGNKRGRNSRNKFQGAAKKWEENQRRWKCEWDRERLELDRRLKEQLNLSRSGSGGAASSINHSDVLEALSRALRKTEESYLDVADKMLMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKVEPDYWLGKIRQDLERINEETMNDLESWDVDTSNLVPSLSAIQLTKDHSTSVEEEIQKIKKDHPDDPFAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYISCLPYLKHHRLGPKDKFLILCSDGLYQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00562 720 PANTHER PROTEIN PHOSPHATASE 2C 19 720 IPR015655 GO:0004722|GO:0006470
Gma12g00562 720 PANTHER - 19 720 - -
Gma12g00562 720 MobiDBLite consensus disorder prediction 367 386 - -
Gma12g00562 720 ProSiteProfiles PPM-type phosphatase domain profile. 262 711 IPR001932 -
Gma12g00562 720 CDD PP2Cc 434 711 IPR001932 -
Gma12g00562 720 SUPERFAMILY PP2C-like 276 712 IPR036457 -
Gma12g00562 720 MobiDBLite consensus disorder prediction 364 393 - -
Gma12g00562 720 SMART PP2C_4 263 709 IPR001932 -
Gma12g00562 720 Gene3D - 239 716 IPR036457 -
Gma12g00562 720 Pfam Protein phosphatase 2C 440 667 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00562 Gma-Chr12 4709332 4712433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00562 1 720 PP2C-type Phosphatase Gene Family AT1G07630 66.712 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00562 - - gmx:100812903 1381.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00562 12 4709332 4712433 Gma12g00562 12 4709332 4712433 ECH
Gma12g00562 12 4709332 4712433 Gma11g01263 11 10771948 10775193 GST