Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00528 ATGGAATCTGATCATCATCATGAAGCAGCATCAGACAATCATCCCTCTGATGGAGAGGAGCAAGGTGCAAGTCACGTGACATCTAGGTCCTACGAGTGCAACTTCTGCCGGAGGGGCTTCTCTAATGCACAAGCACTAGGGGGACACATGAACATCCACAGAAAAGACAAAGCCAAGCTCAAGCAACAACAATCTTCAAACCAAATTCAACAGGATCCGGCCAAGTCTGGTGGTGAAGAGAGTAACAAACCAAACTGGAATTGGAATGTGTCTCCACAAGAACATGTCATTCACAAGAGGCATCAGCTTCCACTCTTTGCCGAAACACCAACTAGCAGTGAAACACAAAAGCCACAAGGTCAAACTCAAACTACTACTGAACAAACTTTGTTATCTACTCATCAAGATTCCTCATCGGAGTTAGACCTTGAACTGAGACTAGGACCTGAACCACAGGATTCATCAGCAGAAACGGATACAAGAAATTTTTTTTGA 495 0.4424 MESDHHHEAASDNHPSDGEEQGASHVTSRSYECNFCRRGFSNAQALGGHMNIHRKDKAKLKQQQSSNQIQQDPAKSGGEESNKPNWNWNVSPQEHVIHKRHQLPLFAETPTSSETQKPQGQTQTTTEQTLLSTHQDSSSELDLELRLGPEPQDSSAETDTRNFF 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00528 164 MobiDBLite consensus disorder prediction 1 19 - -
Gma12g00528 164 Gene3D Classic Zinc Finger 16 86 - -
Gma12g00528 164 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 111 - -
Gma12g00528 164 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 111 156 - -
Gma12g00528 164 ProSiteProfiles Zinc finger C2H2 type domain profile. 31 58 IPR013087 -
Gma12g00528 164 MobiDBLite consensus disorder prediction 106 138 - -
Gma12g00528 164 MobiDBLite consensus disorder prediction 47 164 - -
Gma12g00528 164 ProSitePatterns Zinc finger C2H2 type domain signature. 33 53 IPR013087 -
Gma12g00528 164 PANTHER OS07G0101800 PROTEIN 1 111 - -
Gma12g00528 164 PANTHER OS07G0101800 PROTEIN 111 156 - -
Gma12g00528 164 SUPERFAMILY beta-beta-alpha zinc fingers 28 58 IPR036236 -
Gma12g00528 164 MobiDBLite consensus disorder prediction 62 92 - -
Gma12g00528 164 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00528 Gma-Chr12 4383882 4384376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00528 28 160 C2H2 Transcription Factor Family AT3G53820 35.971 6.29e-21 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma12g00528 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00528 - - gmx:100527724 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00528 12 4383882 4384376 Gma12g00528 12 4383882 4384376 ECH
Gma12g00528 12 4383882 4384376 Gma11g01228 11 10465066 10465572 GST